Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g1157 ATGGGTTCTTTGAAGGTGAGTCGATCGACGACGGTGCTGAAATGGGTGGGATTTGTCTCCGCCGTGTGGGTTCAGGCGATTTCCGGCAACAACTACACGTTTTCGAACTACTCCGACGCCCTGAAGTCTCTGATGAATTTGACCCAACTTGAACTGAACAATCTGTCGGTGGCTAAAGACGTCGGAAAGGCGTTTGGTCTTCTCGCCGGAATAGCCTGCGATCGGTTCCCCACTTGGGTCATCTTGCTTATTGGATCTCTTGAAGGCCTTCTTGGCTATGGCGCCCAGTGGCTCGTCGTTAGCCGCAGAATTTCCCCTCTTCCTTACTGGCAGATGTGCATCTTTTTGTGTATGGGTGGAAACAGCACGACATGGATGAACACGGCGGTGCTGGTTACCTGCATCAGAAACTTCCGGAAGAATCGCGGCCCAGTTTCCGGCATTCTTAAAGGCTACGTCGGCCTCAGCACCGCCATTTTCACCGATCTTTGTACTGCTCTGTTTTCCGATGACCCATCTTCCTTCCTCGTCATGCTAGCCGTTGTCCCCTTCGCCGTCTGCCTCTTCGCCATGTTCTTCCTCCGCGAGATCCCACCTCCGGCCACCGCCAACGCCGCCGCCGAAGCCCAAGAAGAGTCCAACTTCTTCGCCGTCTTCAACGCCCTCGCCGTCGTCGTCGCCGTCTATCTCTTGGGCTTCGATTTCATCAAAAACTCCGGCAGAGTCGTCTCCCATTTGTTCTCCGGTGGGTTACTGATTCTCCTCGGATCCCCTTTGATTATTCCGATTTACTCGCTCTTCAAGAGCTGGCACTCGAATCGGTCCCGATCAGATTTGGAGGCCCGAATTGAGGAGCCGTTGCTGAAGGAAGAAGCGGCGGTGCCGCCGGTGAAGGAGGAGGAAATTGCAGAGGAGAGGAGACAGCCGGTGATCGGAGAAGAACACACGATTTTCGAGGCACTGAAAACGGTTGATTTCTGGGTTTTGTTCGTGTCGTTTCTGTGCGGCGTTGGAACTGGATTGGCGGTGATGAACAATATGGGTCAGATCGGATTGGCTCTTGGCTACGCCGATGTTTCCATGTTCGTTTCTCTGACAAGTATTTGGGGCTTTTTCGGTCGGATTCTTTCCGGTACCCTTTCCGAGCATTTTCTCAATCAAGCCGGCACACCAAGGCCTCTATGGAACGCAGCATCTCAAATTCTAATGGCCGTTGGCTACGTTTTGATGGCCATAGCAATGCCGGGGTCCCTCTACATTGGCTCGGTCGTCGTCGGGATCTGCTATGGCGTACGTCTCTCCGTCACCGTCCCCACCGCCTCCGAGCTCTTCGGCCTCAAATACTACGGTCTCATCTACAACATTCTCATCCTCAACCTCCCCATCGGTTCCTTCCTCTTCTCGGGCCTCCTCGCCGGGTTCCTCTACGACATGGAGGCGACCCCGACCGAAGGCGGTGGCAACACCTGCATCGGCGGGCATTGCTACAGAATTGTCTTCCTTGTGATGGCTTTAGCTTGTGTCATTGGCTTCGTTTTGGACATTTGGTTGGCCTTTAGAACCAAGGCGCTTTATTCCAAGCTGAAAGCCAACAAAAAATCGAAGAAAGGAAACAGCAACAACAGCTCGTAG 1632 53.55 MGSLKVSRSTTVLKWVGFVSAVWVQAISGNNYTFSNYSDALKSLMNLTQLELNNLSVAKDVGKAFGLLAGIACDRFPTWVILLIGSLEGLLGYGAQWLVVSRRISPLPYWQMCIFLCMGGNSTTWMNTAVLVTCIRNFRKNRGPVSGILKGYVGLSTAIFTDLCTALFSDDPSSFLVMLAVVPFAVCLFAMFFLREIPPPATANAAAEAQEESNFFAVFNALAVVVAVYLLGFDFIKNSGRVVSHLFSGGLLILLGSPLIIPIYSLFKSWHSNRSRSDLEARIEEPLLKEEAAVPPVKEEEIAEERRQPVIGEEHTIFEALKTVDFWVLFVSFLCGVGTGLAVMNNMGQIGLALGYADVSMFVSLTSIWGFFGRILSGTLSEHFLNQAGTPRPLWNAASQILMAVGYVLMAIAMPGSLYIGSVVVGICYGVRLSVTVPTASELFGLKYYGLIYNILILNLPIGSFLFSGLLAGFLYDMEATPTEGGGNTCIGGHCYRIVFLVMALACVIGFVLDIWLAFRTKALYSKLKANKKSKKGNSNNSS 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10546122 10550979 + Tan0011967.1 Tan05g1157 752465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g1157 543 SUPERFAMILY MFS general substrate transporter 16 523 IPR036259 -
Tan05g1157 543 Pfam Nodulin-like 14 263 IPR010658 -
Tan05g1157 543 Gene3D MFS general substrate transporter like domains 7 208 IPR036259 -
Tan05g1157 543 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 528 - GO:0016020(PANTHER)
Tan05g1157 543 CDD MFS_Mch1p_like 13 510 - -
Tan05g1157 543 Gene3D MFS general substrate transporter like domains 322 541 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2535 Tan-Chr4:84370232 Tan05g1157 Tan-Chr5:10546122 1.20E-95 dispersed
Tan05g1157 Tan-Chr5:10546122 Tan11g0143 Tan-Chr11:1360866 3.70E-91 dispersed
Tan05g1157 Tan-Chr5:10546122 Tan05g1158 Tan-Chr5:10546122 9.40E-244 tandem
Tan06g2207 Tan-Chr6:72361412 Tan05g1157 Tan-Chr5:10546122 5.80E-66 transposed
Tan02g0698 Tan-Chr2:6543250 Tan05g1157 Tan-Chr5:10546122 1.40E-204 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g1157 - - - 0.0