Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g1158 ATGTGCATCTTTTTGTGTATGGGTGGAAACAGCACGACATGGATGAACACGGCGGTGCTGGTTACCTGCATCAGAAACTTCCGGAAGAATCGCGGCCCAGTTTCCGGCATTCTTAAAGGCTACGTCGGCCTCAGCACCGCCATTTTCACCGATCTTTGTACTGCTCTGTTTTCCGATGACCCATCTTCCTTCCTCGTCATGCTAGCCGTTGTCCCCTTCGCCGTCTGCCTCTTCGCCATGTTCTTCCTCCGCGAGATCCCACCTCCGGCCACCGCCAACGCCGCCGCCGAAGCCCAAGAAGAGTCCAACTTCTTCGCCGTCTTCAACGCCCTCGCCGTCGTCGTCGCCGTCTATCTCTTGGGCTTCGATTTCATCAAAAACTCCGGCAGAGTCGTCTCCCATTTGTTCTCCGGTGGGTTACTGATTCTCCTCGGATCCCCTTTGATTATTCCGATTTACTCGCTCTTCAAGAGCTGGCACTCGAATCGGTCCCGATCAGATTTGGAGGCCCGAATTGAGGAGCCGTTGCTGAAGGAAGAAGCGGCGGTGCCGCCGGTGAAGGAGGAGGAAATTGCAGAGGAGAGGAGACAGCCGGTGATCGGAGAAGAACACACGATTTTCGAGGCACTGAAAACGGTTGATTTCTGGGTTTTGTTCGTGTCGTTTCTGTGCGGCGTTGGAACTGGATTGGCGGTGATGAACAATATGGGTCAGATCGGATTGGCTCTTGGCTACGCCGATGTTTCCATGTTCGTTTCTCTGACAAGTATTTGGGGCTTTTTCGGTCGGATTCTTTCCGGTACCCTTTCCGAGCATTTTCTCAATCAAGCCGGCACACCAAGGCCTCTATGGAACGCAGCATCTCAAATTCTAATGGCCGTTGGCTACGTTTTGATGGCCATAGCAATGCCGGGGTCCCTCTACATTGGCTCGGTCGTCGTCGGGATCTGCTATGGCGTACGTCTCTCCGTCACCGTCCCCACCGCCTCCGAGCTCTTCGGCCTCAAATACTACGGTCTCATCTACAACATTCTCATCCTCAACCTCCCCATCGGTTCCTTCCTCTTCTCGGGCCTCCTCGCCGGGTTCCTCTACGACATGGAGGCGACCCCGACCGAAGGCGGTGGCAACACCTGCATCGGCGGGCATTGCTACAGAATTGTCTTCCTTGTGATGGCTTTAGCTTGTGTCATTGGCTTCGTTTTGGACATTTGGTTGGCCTTTAGAACCAAGGCGCTTTATTCCAAGCTGAAAGCCAACAAAAAATCGAAGAAAGGAAACAGCAACAACAGCTCGTAG 1299 53.73 MCIFLCMGGNSTTWMNTAVLVTCIRNFRKNRGPVSGILKGYVGLSTAIFTDLCTALFSDDPSSFLVMLAVVPFAVCLFAMFFLREIPPPATANAAAEAQEESNFFAVFNALAVVVAVYLLGFDFIKNSGRVVSHLFSGGLLILLGSPLIIPIYSLFKSWHSNRSRSDLEARIEEPLLKEEAAVPPVKEEEIAEERRQPVIGEEHTIFEALKTVDFWVLFVSFLCGVGTGLAVMNNMGQIGLALGYADVSMFVSLTSIWGFFGRILSGTLSEHFLNQAGTPRPLWNAASQILMAVGYVLMAIAMPGSLYIGSVVVGICYGVRLSVTVPTASELFGLKYYGLIYNILILNLPIGSFLFSGLLAGFLYDMEATPTEGGGNTCIGGHCYRIVFLVMALACVIGFVLDIWLAFRTKALYSKLKANKKSKKGNSNNSS 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10546122 10550979 + Tan0011967.2 Tan05g1158 752466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g1158 432 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 417 - GO:0016020(PANTHER)
Tan05g1158 432 Gene3D MFS general substrate transporter like domains 210 430 IPR036259 -
Tan05g1158 432 Pfam Nodulin-like 1 152 IPR010658 -
Tan05g1158 432 SUPERFAMILY MFS general substrate transporter 3 412 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0698 Tan-Chr2:6543250 Tan05g1158 Tan-Chr5:10546122 4.20E-153 dispersed
Tan05g1158 Tan-Chr5:10546122 Tan11g0143 Tan-Chr11:1360866 5.60E-66 dispersed
Tan05g1157 Tan-Chr5:10546122 Tan05g1158 Tan-Chr5:10546122 9.40E-244 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g1158 - - - 0.0