Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g1225 ATGTCACCGGAGACGACGAGAAGCAACAAGATCCGGCGCATTGTCCGCCTCCGTCAAATGCTACAACACTGGCGCAAGAAGGCACACGCAGCGTCCTCCCTACCGCCGTCCGACGTCCCCGCCGGTCACATCGCCGTCTGCGTCGGCAGCGGCAGCCGGCGATTCATCGTACGAGCGACCTTCCTGAACCATCCGATCTTCCGGAAGCTCCTCTCGCAAGCCGAAGAAGAATACGGCTTCACTACGCTAGGTCCTCTAGCGCTTCCGTGCGACGAATCGGTCTTCGAAGAGGTTCTCCGAGTCGTCGCTCGCTCCGAGTTGAGTAACTCATCGCGAAATCCGAATCTCAAGGATTTGCAGAGACGATGCGACGAAGATGTCAGAAAGAACCTCGAGTTTTTAGGCGAATCGAGGCCTTTACTGTATGGATTTGCTGATAATGAATCCGTCTGTTGA 456 55.92 MSPETTRSNKIRRIVRLRQMLQHWRKKAHAASSLPPSDVPAGHIAVCVGSGSRRFIVRATFLNHPIFRKLLSQAEEEYGFTTLGPLALPCDESVFEEVLRVVARSELSNSSRNPNLKDLQRRCDEDVRKNLEFLGESRPLLYGFADNESVC 151
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 12188271 12189047 - Tan0014696.1 Tan05g1225 752533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g1225 151 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 17 102 IPR003676 GO:0009733(InterPro)
Tan05g1225 151 Pfam Auxin responsive protein 16 101 IPR003676 GO:0009733(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4998 Tan-Chr1:115725605 Tan05g1225 Tan-Chr5:12188271 1.00E-46 wgd
Tan02g0737 Tan-Chr2:6895292 Tan05g1225 Tan-Chr5:12188271 1.50E-45 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g1225 K14488 - csv:101222974 259.61