Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g1265 ATGTTCTCACTTTCGCATTCAATTTCTCAGTCTGCCACCAATTTTCCCTTTCTTTCAATCCCTTTAATTCCCTTTAAACCCACCTCTCTTTCGTCCCATTTCTCCACTTCCTCCGCCTCATCTCTTCCTTCCCTCTTCCTTTCTCTCCCTTCCCGCCCTTCTCAGTTCGGTTCTTCAGTAATGTCCTCCAATTCCCATTTCTCTAACCATGTCGACACTGCCGTCGACCTGGGTTTTGACGGTCACGACCTCGATCGCTTTGCTGAAGTTGCCAACAGGGTTGCGGATGCTGCTGGGGAAGTGATCCGGAAGTACTTTCGCAAGAAGTTCGAGATCATGGATAAGGCGGATTTCAGTCCTGTGACTGTGGCTGATCAAGCAGCAGAGGAATCTATGGTTTCAGTTATATTGGAGAATTTTCCTTCTCATGCTATTTATGGTGAGGAAAAGGGATGGAGGTGCAAAGAGAACGTAGCTGATTATGTTTGGGTTTTAGATCCAATAGATGGAACAAAGAGTTTTATTACTGGAAAGCCCCTGTTTGGCACTCTCATTGCATTGTTATATAGAGGGAAGCCGATTTTGGGCATCGTTGATCAGCCTGTTTTGAGAGAAAGATGGTTAGGTTTAAGTGGAAGGAGAACTACATTGAATGGACAAAATGTATCTACGCGATCTTGTTCAGACATATCACAGGCCTACTTATATACTACAAGCCCACATCTATTCAGTGGGGAAGCAGAAGAGGCATTTGTTCGAGTGAGGAACAAGGTAAAAACATCAAAAGTTCACTTGGTGTTTCATTTGGTTCACATGGTTAGAAAGAAACCACAGATTTGTTTGTGGGAATAG 852 43.9 MFSLSHSISQSATNFPFLSIPLIPFKPTSLSSHFSTSSASSLPSLFLSLPSRPSQFGSSVMSSNSHFSNHVDTAVDLGFDGHDLDRFAEVANRVADAAGEVIRKYFRKKFEIMDKADFSPVTVADQAAEESMVSVILENFPSHAIYGEEKGWRCKENVADYVWVLDPIDGTKSFITGKPLFGTLIALLYRGKPILGIVDQPVLRERWLGLSGRRTTLNGQNVSTRSCSDISQAYLYTTSPHLFSGEAEEAFVRVRNKVKTSKVHLVFHLVHMVRKKPQICLWE 283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 13750724 13754613 - Tan0020831.1 Tan05g1265 752573

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g1265 283 ProSitePatterns Inositol monophosphatase family signature 1. 163 176 IPR020583 -
Tan05g1265 283 PANTHER PHOSPHATASE 83 263 IPR051090 GO:0042578(PANTHER)
Tan05g1265 283 SUPERFAMILY Carbohydrate phosphatase 83 258 - -
Tan05g1265 283 Gene3D - 76 222 - -
Tan05g1265 283 PRINTS Inositol monophosphatase superfamily signature 119 139 IPR000760 -
Tan05g1265 283 PRINTS Inositol monophosphatase superfamily signature 141 157 IPR000760 -
Tan05g1265 283 PRINTS Inositol monophosphatase superfamily signature 212 235 IPR000760 -
Tan05g1265 283 PRINTS Inositol monophosphatase superfamily signature 163 179 IPR000760 -
Tan05g1265 283 Pfam Inositol monophosphatase family 83 243 IPR000760 -
Tan05g1265 283 FunFam Inositol monophosphatase 75 222 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g1265 K18649 - - csv:101205614 416.387
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g1265 Tan-Chr5:13750724 Tan05g2820 Tan-Chr5:80571256 2.10E-13 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g341 . . . . . . . . . . . Cma20g00827 . Car20g00712 . . . . . . . . . . . . . . . . . Cone12ag1167 Cone8ag1215 . . Lsi10g00398 . Chy11g00353 . Blo04g00524 . . . . . . . Sed01g0282 . Cmo20g00837 . . . . Cpe16g00262 . Bhi10g01970 Tan05g1265 Cmetu11g1211 . Hepe08g0993 . . . . . . . . . . Csa02g01288 . Cme11g00142
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011027 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 31