Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g1321 ATGTCTTCTTCCTCGGATTCTCCGCCACCTACTTCCGATTCCCCGCCTCCCTCTGATTCTTCTCCACCTCCCTCCGCCTCGCCGCCACCCGATTCTTCTCCGCCTCCTCCGCCCGATTCATCTCCACCTCCGCCGGAGGATTCGTCCCCACCTCCGCCGGTGGATTCGTCTCCGCCGCCTCCCTCAGACTCCTCCTCCTCCTCCTCGCCTCCTGAAGATTCCTCTTCATCGCCTCCGCCACCACCACCGAAAGACTCGAAGTCTTCATCTCCTGATCCTCCGCCACCGCCACCGCCACCGCCACCGCCTCCGCCACCCCCGCCGCCGCCGCCTCCACCACCACATGGATCCTCTAGGCATTCTCCTCCTCCGCCGAAATCGATCTCCTCCCCACCTAATTCTCGATCCTCAGACTCCGGAGCTACGCCCCAGGCGGTGCCGATTATTGTAGGAGTGGCGGTGGCGGCAGGTTTTTTGCTATTCGCCATGGCATTGATATTCTTCGCTTGCAGCCGAAAGAAAAAGAAGCGAAATAGTAATTCCATGTACTACGATGACCAGCCTCGTCCCAAAGGTGGGGATCCATATTACAACGGAAGGAATCACAACTGGAACAACACGGCCGGCGAACACTACGTGAACATGGCGCCAATCAGCGGCGGAGGGCAGGGAGGAGGTTGGCCGTCGCCACCGCCGCCGCCACCGCCGGGATTAGTGAGCAGCGACATGAGCTCGAATTTCTCAGGGCCACACGGGCCGCCGTTGCCGCCGCCGCACCCGTCGGTGGCGTTGGGGTTCAACAAGAGCATGTTCACGTTCGACGAGCTGATGGCGGCGACAGGGGGATTCTCTCCGGCGAACTTGTTGGGGCAAGGGGGATTCGGGTACGTTCATAAAGGAGTGCTGCCCAACGGCAAGGAAATCGCGGTGAAGAGCCTGAAATCGGGTAGCGGGCAAGGAGATCGGGAATTCGCGGCGGAAGTGGAGATCATCAGCCGCGTCCACCACCGCCATTTGGTGTCCCTCGTCGGATACTGCATCGCCGGTGAACGGAAGATGTTGGTTTACGAATTTGTTCCTAATAACAACCTCGAATTCCACCTTCACGGAATGGGGCGGCCACCGTTGGACTGGCCGACCAGGGTCAAGATCGCATTGGGTTCAGCTAAGGGCCTGGCCTATCTCCACGAAGACTGTCATCCTCGTATCATCCATAGAGACATCAAAACTGCAAATATTCTTATAGACATGAGTTTTGAAGCCAAGGTGGCTGATTTTGGATTGGCGAAGCTCAACCAGGACAATTTCACACATGTATCCACTCGCGTTATGGGCACATTTGGGTATTTGGCTCCAGAGTACGCATCAAGTGGGAAGCTAACAGAGAAATCAGACGTATTCTCATATGGAGTAATGCTTTTGGAGCTCATAACTGGAAGACAACCAGTGGACACGACCGGGGAGCTGATGGAGGACAGCTTAGTGGACTGGTCGAGGCCTCTTTGCTTGAAAGCATTAAATGATGGAAAGTACGAGGAGTTGGGTGATCCAAAGTTGGAGAAGAATTATGACGCTCAGGAAATGGCTTGCATGGTTGCTTGCGCCTGTGCTTGCATTCGCCATTCTGCTAGACGGCGTCCCAAAATGAGCCAGATCGTACGGGCACTGGAAGGAGACGTGTCGCTGGAAGACTTAAACGAGGGAGTAAAACCAGGGCAGAGCACGTACTTGGGGTCAGGGACGTCGTCGGAGTACGACGCAAGCTCGTACAGTGCGGACATGAAAAGGTTCCGAAAGGTAGCGTTGGACAGCCGCGAGTATACAAGCAGCGATTACGGAGGCACGAGTGAGTACGGCCTAAACCCATCCTCAACCAGTAGCGAAAACAGCCGGAAGCCCACCCCCCTGTCCTCCCCCAATTTACCCCCCGACAACCCCTAA 1941 56.47 MSSSSDSPPPTSDSPPPSDSSPPPSASPPPDSSPPPPPDSSPPPPEDSSPPPPVDSSPPPPSDSSSSSSPPEDSSSSPPPPPPKDSKSSSPDPPPPPPPPPPPPPPPPPPPPPPHGSSRHSPPPPKSISSPPNSRSSDSGATPQAVPIIVGVAVAAGFLLFAMALIFFACSRKKKKRNSNSMYYDDQPRPKGGDPYYNGRNHNWNNTAGEHYVNMAPISGGGQGGGWPSPPPPPPPGLVSSDMSSNFSGPHGPPLPPPHPSVALGFNKSMFTFDELMAATGGFSPANLLGQGGFGYVHKGVLPNGKEIAVKSLKSGSGQGDREFAAEVEIISRVHHRHLVSLVGYCIAGERKMLVYEFVPNNNLEFHLHGMGRPPLDWPTRVKIALGSAKGLAYLHEDCHPRIIHRDIKTANILIDMSFEAKVADFGLAKLNQDNFTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSYGVMLLELITGRQPVDTTGELMEDSLVDWSRPLCLKALNDGKYEELGDPKLEKNYDAQEMACMVACACACIRHSARRRPKMSQIVRALEGDVSLEDLNEGVKPGQSTYLGSGTSSEYDASSYSADMKRFRKVALDSREYTSSDYGGTSEYGLNPSSTSSENSRKPTPLSSPNLPPDNP 646
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 16492719 16500014 - Tan0008254.1 Tan05g1321 752629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g1321 646 MobiDBLite consensus disorder prediction 565 588 - -
Tan05g1321 646 MobiDBLite consensus disorder prediction 73 130 - -
Tan05g1321 646 MobiDBLite consensus disorder prediction 9 66 - -
Tan05g1321 646 MobiDBLite consensus disorder prediction 1 142 - -
Tan05g1321 646 MobiDBLite consensus disorder prediction 608 635 - -
Tan05g1321 646 SUPERFAMILY Protein kinase-like (PK-like) 258 556 IPR011009 -
Tan05g1321 646 Gene3D Phosphorylase Kinase; domain 1 261 358 - -
Tan05g1321 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 403 415 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g1321 646 ProSiteProfiles Protein kinase domain profile. 283 562 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g1321 646 SMART serkin_6 283 556 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g1321 646 FunFam proline-rich receptor-like protein kinase PERK1 261 358 - -
Tan05g1321 646 MobiDBLite consensus disorder prediction 572 588 - -
Tan05g1321 646 MobiDBLite consensus disorder prediction 214 260 - -
Tan05g1321 646 ProSitePatterns Protein kinases ATP-binding region signature. 289 311 IPR017441 GO:0005524(InterPro)
Tan05g1321 646 FunFam Proline-rich receptor-like protein kinase PERK1 359 567 - -
Tan05g1321 646 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 112 600 IPR047117 -
Tan05g1321 646 MobiDBLite consensus disorder prediction 176 202 - -
Tan05g1321 646 Gene3D Transferase(Phosphotransferase) domain 1 359 568 - -
Tan05g1321 646 Pfam Protein tyrosine and serine/threonine kinase 288 556 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g1321 646 MobiDBLite consensus disorder prediction 605 646 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1305 Tan-Chr1:12805737 Tan05g1321 Tan-Chr5:16492719 4.40E-157 dispersed
Tan04g2560 Tan-Chr4:84550708 Tan05g1321 Tan-Chr5:16492719 6.10E-77 dispersed
Tan05g1321 Tan-Chr5:16492719 Tan09g1285 Tan-Chr9:65032981 5.00E-159 dispersed
Tan05g1315 Tan-Chr5:16328716 Tan05g1321 Tan-Chr5:16492719 2.10E-38 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67606 PF07714 PK_Tyr_Ser-Thr 1.80E-45 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g1321 - - - 0.0