Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g1394 ATGCCTCCCAACACTCCCATTATCCTCTCTTCTCTCTTTCTAATTCTCTCCTTCTTCTTTATTCCATCTCTTTCGGCCCCTAATTACAATTATAAGTATCAGAAAGCTTACACCCAACTTAGATACGATTTTTACGACGAATCGTGCCCTCGTTTACCAATGATAATTCGATTTCGTACCTGGACTGCTGTCCAAAATGACTCTAGAATTGCTGCATCACTATTGCGGTTGCAGTTTCATGATTGTATTGTAGACGGATGTGATGCATCAGTGTTGCTTGACGATACTAAAGATATGAAAGGTGAGAAAAATGCTCCAGGCAATGTGAAATCGCTCCGAGGGTTTGAAGTGATAGATGCCATAAAAGCAGATGTAGAAACATATTGTCCAGAGACAGTTTCATGTGTCGATATATTAGGTCTTGCAGCTAGAGAAGCTGTGTATCTGGTGGGAGGGCCATCTTGGAACCTTCCACTAGGACGTAGAGATGGCTTAAATGCAAGCATAAAATCCGTCCTGGAACAGCTGCCATCCCCCAAGGCATCTCTAGAGAACAACACCGCCAAGTTCATCTCAAAGGGCCTCGATTTAAAGGACCTCGTCGTGCTTTCAGGCGCCCACACCATCGGCTTCGCCCGCTGCGTCACATTCAAGGCCCGCCTCTTCAACTACAAGGGCTCCGGCCAGCCCGACCCCGACATCAACGCCGCCATGCTCTCCGATCTGCGCTCCATGTGCCCCAATAGAAACGATGGCACCAACGCCAATTTGGCCCCCCTGGATGTGTCCAGTTACGACAGATTCGACAACGAGTACTTCACGAACCTGATTAGCGGCGTCGGGCTTTTGGAGTCGGACCAGAGTCTGATGGCGGACAGCTACGCGACTCAGATGGTCAGACAGTACAGCTTTGATACCAATTTGTTCTTCGATGACTTCGCAGAGTCGATGTTCAGGATGAGCTTGGTTGGGGTTCTGACTGGTCGCGATGGCCAAATTCGAAAGGATTGTCACGCTGTTAATGTTGAGGATGGGTATTGA 1041 48.32 MPPNTPIILSSLFLILSFFFIPSLSAPNYNYKYQKAYTQLRYDFYDESCPRLPMIIRFRTWTAVQNDSRIAASLLRLQFHDCIVDGCDASVLLDDTKDMKGEKNAPGNVKSLRGFEVIDAIKADVETYCPETVSCVDILGLAAREAVYLVGGPSWNLPLGRRDGLNASIKSVLEQLPSPKASLENNTAKFISKGLDLKDLVVLSGAHTIGFARCVTFKARLFNYKGSGQPDPDINAAMLSDLRSMCPNRNDGTNANLAPLDVSSYDRFDNEYFTNLISGVGLLESDQSLMADSYATQMVRQYSFDTNLFFDDFAESMFRMSLVGVLTGRDGQIRKDCHAVNVEDGY 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 19719827 19722465 + Tan0006210.1 Tan05g1394 752702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g1394 346 CDD secretory_peroxidase 39 340 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan05g1394 346 PRINTS Haem peroxidase superfamily signature 133 150 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1394 346 PRINTS Haem peroxidase superfamily signature 151 163 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1394 346 PRINTS Haem peroxidase superfamily signature 199 214 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1394 346 PRINTS Haem peroxidase superfamily signature 71 85 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1394 346 PRINTS Haem peroxidase superfamily signature 261 276 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1394 346 ProSiteProfiles Plant heme peroxidase family profile. 39 341 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1394 346 FunFam Peroxidase 43 190 - -
Tan05g1394 346 ProSitePatterns Peroxidases active site signature. 71 82 IPR019794 GO:0004601(InterPro)
Tan05g1394 346 PRINTS Plant peroxidase signature 132 142 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1394 346 PRINTS Plant peroxidase signature 151 166 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1394 346 PRINTS Plant peroxidase signature 198 210 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1394 346 PRINTS Plant peroxidase signature 49 68 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1394 346 PRINTS Plant peroxidase signature 73 93 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1394 346 PRINTS Plant peroxidase signature 275 292 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1394 346 PRINTS Plant peroxidase signature 259 274 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1394 346 PRINTS Plant peroxidase signature 113 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1394 346 PRINTS Plant peroxidase signature 315 328 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1394 346 FunFam Peroxidase 177 320 - -
Tan05g1394 346 ProSitePatterns Peroxidases proximal heme-ligand signature. 199 209 IPR019793 -
Tan05g1394 346 SUPERFAMILY Heme-dependent peroxidases 39 341 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1394 346 Pfam Peroxidase 61 303 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1394 346 Gene3D - 43 341 - -
Tan05g1394 346 Gene3D Peroxidase, domain 2 177 320 - -
Tan05g1394 346 PANTHER PEROXIDASE 72-RELATED 20 340 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g1394 Tan-Chr5:19719827 Tan07g0685 Tan-Chr7:10797187 4.30E-77 dispersed
Tan06g1549 Tan-Chr6:23736421 Tan05g1394 Tan-Chr5:19719827 4.10E-48 transposed
Tan03g1516 Tan-Chr3:71426335 Tan05g1394 Tan-Chr5:19719827 3.60E-97 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g1394 K00430 - csv:101209504 555.058