Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g1437 ATGGCTTCTTCTTCGCCGAATCACCTTCGAGTAGGCTACGCTTTTCCCCCAAACAAAGAGCGCAATGTGATTCGCCCGTCTCTGATTGAGTACGCAAAGCTCCACGGCGTCGACTTGGTCCGTATCGACCTCCAAACGCCGCTCCTCCACCAAGGTCCGTTTCACTGCATCATCCACAAGCTCTACGACGATGCTTGGGCGGAGCATCTGGAGGATTTCGCCTCGAAGAATCCGGACGTCGTCGTCGTGGATCGGCCGGACCTGATCTCGCAACTCTACAACAGAGTATCGATGCTGGATGTGGTGAGCCAGGTGAAGGTCTCAGACAGCGGCATGAAGATCGAGGTGCCGAAACAGGTGATTTTGAACCAGGAGAATAGAGAACCCGATTTGATTAGGGATTTGGAGGTGAAATTTCCAGTGATTGCGAAGCCGTTGGAGTCGAATGGAAGTGCGAAATCGCACGAAATGTCTCTGGTTTTCAATCGACGCGGATTGAAGGATTTGGAAACGCCAGTGCTTCTGCAGGAATTTGTGAACCACGGCGGAGTAATGTTCAAGGTTTATGTGGCTGGAGAGCAATCGGTGTGCGTGAAGAGGAAATCGCTGCCGGATGTGGCGGAAACAGAGGAGGAACTGGAGAAGAAACCAGACGGCGCGATTAAGTTTTCGCAGATATCTAGGGCAGAGGAGAAGAGCGAAAAATGCAATGGCGGCGGAAAGAAGGAGGCGGCGGCGGCGGAGGAGGAGATAGAAATGCCGCCGGAGAAGGTAGTGACGGAGGTGTCGAGAGGGCTGAGGGAAGGCATGGGGATTAGGCTGTTCAATTTCGACATGATTAGGGATCGGAATGGAACGTACTATGTGATCGATATAAATTACTTACCAGGATTTGCAGTGCTGCCGGAGTACGAGCCGTTTCTGACGAAGTTTTTCAAGGAGGTCACGGAGAAGAAGAAGGTGGAAGAGGATGATTCCGCCATAGAAGAGGAGAAAGCAAAACCACGGTGCTGCTGTTTCAAATGA 1026 51.85 MASSSPNHLRVGYAFPPNKERNVIRPSLIEYAKLHGVDLVRIDLQTPLLHQGPFHCIIHKLYDDAWAEHLEDFASKNPDVVVVDRPDLISQLYNRVSMLDVVSQVKVSDSGMKIEVPKQVILNQENREPDLIRDLEVKFPVIAKPLESNGSAKSHEMSLVFNRRGLKDLETPVLLQEFVNHGGVMFKVYVAGEQSVCVKRKSLPDVAETEEELEKKPDGAIKFSQISRAEEKSEKCNGGGKKEAAAAEEEIEMPPEKVVTEVSRGLREGMGIRLFNFDMIRDRNGTYYVIDINYLPGFAVLPEYEPFLTKFFKEVTEKKKVEEDDSAIEEEKAKPRCCCFK 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 23606327 23607554 + Tan0015118.1 Tan05g1437 752745

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g1437 341 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 86 302 - -
Tan05g1437 341 Gene3D - 87 297 - -
Tan05g1437 341 PIRSF ITPK 1 327 IPR008656 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0032957(InterPro)|GO:0047325(InterPro)|GO:0052725(InterPro)|GO:0052726(InterPro)
Tan05g1437 341 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 112 313 IPR040464 -
Tan05g1437 341 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 9 321 IPR008656 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0032957(InterPro)|GO:0047325(InterPro)|GO:0047325(PANTHER)|GO:0052725(PANTHER)|GO:0052725(InterPro)|GO:0052726(InterPro)|GO:0052726(PANTHER)|GO:0052746(PANTHER)
Tan05g1437 341 MobiDBLite consensus disorder prediction 228 252 - -
Tan05g1437 341 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 10 89 IPR041429 -
Tan05g1437 341 ProSiteProfiles ATP-grasp fold profile. 106 329 IPR011761 GO:0005524(InterPro)|GO:0046872(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g1437 K00913 - - csv:101223134 519.62
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g1437 Tan-Chr5:23606327 Tan07g1995 Tan-Chr7:71644784 9.50E-77 dispersed
Tan05g1437 Tan-Chr5:23606327 Tan05g1439 Tan-Chr5:23729203 3.10E-91 proximal
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g439 . . . . Bpe07g00393 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi10g00292 . . . . . . . . . . . Sed01g0355 . Cmo20g00902 . . . . . . Bhi10g02090 Tan05g1437 Cmetu11g1551 . Hepe08g1091 . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0013619 0 1 0 0 0 1 0 1 1 1 1 1 2 1 1 2 1 0 0 1 1 1 1 1 1 1 1 2 1 0 25