Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g1442 ATGGCTAGTTCCTCGTATGTCTTTTCAATGTCAACTCATCTCCTTTTCATTGTTCTTCTCCTTCTTTACTTTCTTGCTCTCTCTATTGACTCAGTTTCTTTCAAAATTGATCGATTCAAACCCAATGAAAGTGATACACTTTACCAAGGAGATGCTACTCCTTCTGTTGGAGCAGTTGAATTCAACAATATTAACTATCTTTGTCGTGTTGGTTGGGTTATCTATGAAGACCTTGTGCCAATTTGGGACTCTAAAACAGGAAAATCCACTGATTTCTCTACCCATTTTACCTTCATCATTGATACCCAAAATGCGTCGAATTATGGCCATGGACTAGCTTTCTTTTTAGCTCCAATTGGATTTCAAATCCCTCCAAACTCAGCCGGTGGGTTTCTCGGCCTTTTCAACACCACGAATAGTGATTCAACTATCAATCAAATTGTTCATGTTGAGTTTGATTCTTTCTCCAATCAAGAATGGGACCCTCCATTCGAACATGTGGGTATTAACATTAACTCGATTGCTTCTTCTAATTACACACGTTGGAATTCTAGTTTACACAGTGGGGATATTGCCGATGTGTGGATCTCCTACAATTCAACCACCAAAAACTTGAGTGTCTCGTGGAAATACCAAAATTCTTCGCTGACTTCGTTTGAAAACACCACCTTGAGTTACGAGATTGATCTTATGAAGGTTCTTCCTCAATGGGCGACGGTGGGATTTTCAGCTGCAACTGGTATGTATGTAGAGAGACATACATTATTTTCTTGGGAATTCAATTCAAGCTTGGATATAAAGCAAATAAATGAAGATAATGGGAATAAAGTTCATATAATTGTTGGTGTGACGGTTTCTATAGGGGTTTCAATTATCATGGCGATAGTAGCATTTGTAGTACTTTGGAGATTGAAAAAAAAGAAAAGAAAATCAGAAGAAGAAAATGGTGAGGAGGTAAACTTGACCTCCATTAATGATGATTTGGAAAGAGGGGTTGGACCGAGAAGGTTTTCTCGGAAGCTTCTTGCCATGGCCACCAATAACTTCTCAAATGAAAGAAAGCTCGGTGAAGGAGGATTTGGTGCTGTGTATAGAGGATACATACCAGATTTAGATTTGACAATAGCTGTGAAAAAAATTTCAAGGGGTTCGAGGCAAGGAAAAAAAGAATACATAACTGAGGTGAAGATCATTAGTAGGCTTCGCCATCGCAATTTAGTACAACTCATTGGTTGGTGTCATGATAAAGGTGAGTTCTTGCTAGTTTATGAATTCATGCCTAATGGTAGCCTTGATTCTCATATCTTTGGTAGGAGATCTAGAAGCCCTCTTGTGTGGGGTGTGAGATATAAGATTGCTTTAGGGTTAGCCTCTGCCTTGCTATATCTTCATGAAGAATGGGAGCAATGCGTAGTTCATAGAGATATTAAATCTAGCAATGTCATGTTAGATTCACATTTCAATGTGAAGCTTGGAGATTTTGGGTTAGCTCGATTAATGGACCATGAGTTGGGCGCTCAGACAACTGGGTTGGTAGGAACTTTGGGCTACTTAGCTCCTGAATACATAAGCACAGGTAGAGCTAGTAAAGAATCTGATGTGTTTAGCTTTGGGGTGGTTGCTTTAGAGATTGTTACAGGAAGAATGTCTAGAGACTCCATGGAAAAGGAATCTCATAAGGGTTTGGTGGAATGGGTTTGGGATCTTTATGGGAGTGGAAAGCTTCTTATGAGTATGGATGTGAAATTGCAATCTGATTACGACAAAAAACAAGTGGAGTGTTTGATGCTTGTTGGACTTTGGAGTGCTTATCCAGACCCTAATCTTAGACCTTCAATAAGACAAGTAATTCAAGTTCTCAATTTTGAGACGACAATGCCAATTCTTCCAAGTAAAATGCCTGTTGCTCTGTATCATGCTCCTTCCACATCGATGACCTCAAATGATCCTTCCTTTACTGTAAGCCTTGATGCAGGTCGTTGA 1983 39.38 MASSSYVFSMSTHLLFIVLLLLYFLALSIDSVSFKIDRFKPNESDTLYQGDATPSVGAVEFNNINYLCRVGWVIYEDLVPIWDSKTGKSTDFSTHFTFIIDTQNASNYGHGLAFFLAPIGFQIPPNSAGGFLGLFNTTNSDSTINQIVHVEFDSFSNQEWDPPFEHVGININSIASSNYTRWNSSLHSGDIADVWISYNSTTKNLSVSWKYQNSSLTSFENTTLSYEIDLMKVLPQWATVGFSAATGMYVERHTLFSWEFNSSLDIKQINEDNGNKVHIIVGVTVSIGVSIIMAIVAFVVLWRLKKKKRKSEEENGEEVNLTSINDDLERGVGPRRFSRKLLAMATNNFSNERKLGEGGFGAVYRGYIPDLDLTIAVKKISRGSRQGKKEYITEVKIISRLRHRNLVQLIGWCHDKGEFLLVYEFMPNGSLDSHIFGRRSRSPLVWGVRYKIALGLASALLYLHEEWEQCVVHRDIKSSNVMLDSHFNVKLGDFGLARLMDHELGAQTTGLVGTLGYLAPEYISTGRASKESDVFSFGVVALEIVTGRMSRDSMEKESHKGLVEWVWDLYGSGKLLMSMDVKLQSDYDKKQVECLMLVGLWSAYPDPNLRPSIRQVIQVLNFETTMPILPSKMPVALYHAPSTSMTSNDPSFTVSLDAGR 660
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 24222308 24224290 + Tan0019638.1 Tan05g1442 752750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g1442 660 FunFam Lectin-domain containing receptor kinase A4.3 426 640 - -
Tan05g1442 660 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 270 IPR013320 -
Tan05g1442 660 CDD STKc_IRAK 355 621 - -
Tan05g1442 660 ProSiteProfiles Protein kinase domain profile. 349 629 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g1442 660 Pfam Legume lectin domain 32 272 IPR001220 GO:0030246(InterPro)
Tan05g1442 660 ProSitePatterns Protein kinases ATP-binding region signature. 355 379 IPR017441 GO:0005524(InterPro)
Tan05g1442 660 SMART serkin_6 349 625 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g1442 660 Gene3D Phosphorylase Kinase; domain 1 334 425 - -
Tan05g1442 660 FunFam L-type lectin-domain containing receptor kinase IX.1 30 273 - -
Tan05g1442 660 Gene3D - 29 279 - -
Tan05g1442 660 Pfam Protein kinase domain 350 618 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g1442 660 FunFam L-type lectin-domain containing receptor kinase IX.1 334 425 - -
Tan05g1442 660 CDD lectin_legume_LecRK_Arcelin_ConA 32 264 IPR001220 GO:0030246(InterPro)
Tan05g1442 660 SUPERFAMILY Protein kinase-like (PK-like) 333 641 IPR011009 -
Tan05g1442 660 PANTHER - 49 630 IPR050528 GO:0005886(PANTHER)
Tan05g1442 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g1442 660 Gene3D Transferase(Phosphotransferase) domain 1 426 641 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1459 Tan-Chr1:14769357 Tan05g1442 Tan-Chr5:24222308 4.50E-176 dispersed
Tan05g1442 Tan-Chr5:24222308 Tan05g1445 Tan-Chr5:24548145 1.70E-303 dispersed
Tan05g1442 Tan-Chr5:24222308 Tan05g1443 Tan-Chr5:24249330 1.60E-282 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67611 PF00069 Pkinase 7.30E-48 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g1442 - - - 0.0