Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g1445 ATGGAAACCACTTTGTATGCCTTTTCAATGCTTAATCACATCCTTCTCCTATTTCTTTCCTATTTCCCTCTTTTGGTTGACTCAGTTTCTTTCAAAATCGATCAATTCGTGCCCAATGAAAACCGTGTACTTTACGAAGGAGATGCAGTTCCTTCTAATGGAGCAGTTCTATTTAGTGATCCTGCATATACCTGTCATATTGGTCGAGTTATTTACAAAGATGTTGTGCCAATTTGGGACTCTGAAACAGGAAAAGTCACCGATTTCACAACCCATTTCTCCTTCACCATTGATACACAACATGCCTTAAGCTATGGTCATGGAGTTGTTTTTTTCTTGGCTCCAGCTGGGTTTCAAATCCCTCCAAACTCAGCTGGTGGATTTCTTGGCCTTTTCAACAAGACTTACACTGATTCATCCATAAACCAAATCGTTCATGTGGAATTTGATTCTTACTCTGATGATTGGGATCCTATATTTCAACATGTGGGCATAAACATTAACTCTGTTTCTTCCTCTAATTTCACAGAGTGGAATGTCACCTTACATAGCTTGGACACTGTTGATGTGACGATCTCGTATGATTCAACCACTAAAAACTTGAATGTCTCGTGGAAATATCAGAAAACGTCGAATTTTTTTGAGAATACAACACTTTCATACCAGATTGATCTTATGAAAGTTCTTCCTCAATGGGCTACGGTTGGATTTTCAGCTTCAACGGGTGCAAAATCAGAGCGAAATTTGCTATTTTCATGGGAATTCAACTCGAGCTTGGAAATGAAGCATCCAAGTGAAAATAATGGGAAAAAAGTTGATATAATTGTCGGAGTCACAGTTTCACTTGGTGTTTTGATGATTATCATGACAATAATAGCATTTGTAGTATTTTGGAGATTGAAGCAAAAGAAAAGAAAAGCAGAACCAGAGAATCTTGAAGAAGTAAACTTGACATCAATTAACGATGATTTGGAAAGAGGGGTCGGACCGAGAAGGTTTTCTCACAAGCTTCTTGCCATGGCCACCAACAATTTCTCAGATGAAAGGAAGCTTGGTCAAGGAGGATTCGGTGCAGTCTACAGAGGGCACATACAAGACATAGATTTAACAGTAGCTGTGAAGAAAATTTCAAGGGGTTCAAGACAAGGAAGAAAAGAGTATATAACTGAGGTGAAGATCATTAGTAGGCTTCGTCATCGCAATTTGGTGCAACTTATAGGTTGGTGCCATGACAAAGGCGAGTTCTTGCTAGTTTATGAATTCATGCCTAATGGTAGCCTTGATTCTCATCTCTTTGGCAAAAGAAACCCTCTTGTTTGGTCTGTGAGATATAAGATTGTTTTAGGTTTAGCCTCTGCATTGCTATATCTCCATGAAGAATGGGAACAATGCGTAATTCATAGAGATATTAAATCCAGCAATGTCATGTTAGATTCAAACTTCAACGTCAAACTTGGAGATTTTGGGCTAGCTCGACTAATGGACCATGAATTGGGTGCTCAGACAACTGGGTTGGTTGGAACTTTAGGCTACTTAGCCCCTGAATACATAAGCACAGGCAGAGCTAGTAAAGAATCTGATGTATTTAGCTTTGGAGTTGTTGCTTTAGAGATTGCCACTGGAAGAATGTCAAGAACCTCCATGGAAAAAGAGTCTCATAAGGGTTTGGTAGAGTGGGTTTGGGATCTTTATGGAAGTGGACAGTTGCTTGAGGGCATGGATGAGAAATTACAATCATCTGATTGTGACAAAAAACAGGTGGAATGTTTGATGCTTGTTGGACTATGGAGTGCTTATCCGGACCCTAATCTTAGACCTTCGATAAAACAAGCGATTCAAGTTCTTAACTTTGACACAACGATGCCAAATCTTCCATCTAAAATGCCTGTTCCTACGTATCATGCTCCTCCCACATCGATGAGCTCAAATGAACCTTCCATTACTGTGAGTCTTGACATGGGTCGTTGA 1968 39.63 METTLYAFSMLNHILLLFLSYFPLLVDSVSFKIDQFVPNENRVLYEGDAVPSNGAVLFSDPAYTCHIGRVIYKDVVPIWDSETGKVTDFTTHFSFTIDTQHALSYGHGVVFFLAPAGFQIPPNSAGGFLGLFNKTYTDSSINQIVHVEFDSYSDDWDPIFQHVGININSVSSSNFTEWNVTLHSLDTVDVTISYDSTTKNLNVSWKYQKTSNFFENTTLSYQIDLMKVLPQWATVGFSASTGAKSERNLLFSWEFNSSLEMKHPSENNGKKVDIIVGVTVSLGVLMIIMTIIAFVVFWRLKQKKRKAEPENLEEVNLTSINDDLERGVGPRRFSHKLLAMATNNFSDERKLGQGGFGAVYRGHIQDIDLTVAVKKISRGSRQGRKEYITEVKIISRLRHRNLVQLIGWCHDKGEFLLVYEFMPNGSLDSHLFGKRNPLVWSVRYKIVLGLASALLYLHEEWEQCVIHRDIKSSNVMLDSNFNVKLGDFGLARLMDHELGAQTTGLVGTLGYLAPEYISTGRASKESDVFSFGVVALEIATGRMSRTSMEKESHKGLVEWVWDLYGSGQLLEGMDEKLQSSDCDKKQVECLMLVGLWSAYPDPNLRPSIKQAIQVLNFDTTMPNLPSKMPVPTYHAPPTSMSSNEPSITVSLDMGR 655
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 24548145 24550412 - Tan0021866.1 Tan05g1445 752753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g1445 655 MobiDBLite consensus disorder prediction 633 655 - -
Tan05g1445 655 PANTHER - 53 625 IPR050528 GO:0005886(PANTHER)
Tan05g1445 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g1445 655 Gene3D Phosphorylase Kinase; domain 1 330 421 - -
Tan05g1445 655 SMART serkin_6 345 620 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g1445 655 ProSiteProfiles Protein kinase domain profile. 345 624 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g1445 655 FunFam L-type lectin-domain containing receptor kinase IX.1 27 268 - -
Tan05g1445 655 Gene3D - 26 274 - -
Tan05g1445 655 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 263 IPR013320 -
Tan05g1445 655 ProSitePatterns Protein kinases ATP-binding region signature. 351 375 IPR017441 GO:0005524(InterPro)
Tan05g1445 655 FunFam L-type lectin-domain containing receptor kinase IX.1 330 421 - -
Tan05g1445 655 SUPERFAMILY Protein kinase-like (PK-like) 324 618 IPR011009 -
Tan05g1445 655 MobiDBLite consensus disorder prediction 635 649 - -
Tan05g1445 655 Gene3D Transferase(Phosphotransferase) domain 1 422 636 - -
Tan05g1445 655 FunFam Lectin-domain containing receptor kinase A4.3 422 635 - -
Tan05g1445 655 CDD STKc_IRAK 351 616 - -
Tan05g1445 655 Pfam Protein kinase domain 346 613 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g1445 655 Pfam Legume lectin domain 29 267 IPR001220 GO:0030246(InterPro)
Tan05g1445 655 CDD lectin_legume_LecRK_Arcelin_ConA 29 259 IPR001220 GO:0030246(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g1442 Tan-Chr5:24222308 Tan05g1445 Tan-Chr5:24548145 1.70E-303 dispersed
Tan05g1443 Tan-Chr5:24249330 Tan05g1445 Tan-Chr5:24548145 8.20E-279 dispersed
Tan05g1445 Tan-Chr5:24548145 Tan05g1465 Tan-Chr5:25986400 2.10E-298 dispersed
Tan05g1444 Tan-Chr5:24370402 Tan05g1445 Tan-Chr5:24548145 2.30E-71 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67613 PF00069 Pkinase 2.40E-49 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g1445 - - - 0.0