Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan05g1453 | ATGACGGTGACGTGGTTCATCGTCGTCATCACCATCACCATTTCGCTCTGTCTCCGCTCCCTTCTGAACTCCAAGTTTTCCACCAAACTCCCACCAGGCCCTCCTTCAATCCCCATCATTAGCAATATCCAATGGCTCTGCAGATCCCCTCTCCAAACTGAGTTTCTGTTGCACAATTTCATCGCCAAATACGGCCCCATCATCACCCTCCCCATCGGCACCCGCCCCACCATCTTCATCGCCGACCGCTCCATCGCCCACAAGGCCCTCGTCCTCAACGGCACTCTCTTCGCCGACCGTCCCCTGGCCCTTCCCGTCAGTAAGATCGTCTCAAGCAACCAGCACAATATCAACACCGCCTCTTACGGCCCACTCTGGCGTGTCCTCCGCCGCAATCTCACTTCCCAAATCCTCCATCCTTCTCGAGTCAAGTCCTACGGTCCTGCTCGCAAGTGGGTTTTGGATATTCTTCTTAATCGGTTTCTTTCTCACTCTGAATCCGGAAATCCCGTCTGTGTGGTCGATCATTTTCAGTACGCTATGTTCTGTTTGTTGGTCCTGATGTGCTTTGGGGACAAGCTTGACGAATCCCAGATCAAGGAAATTGAGAAAATGCAGCGTACAATGCTGATGAATCTTGGGCGTTTCAATGTCCTGAATTTCTGGCCCAAATTGACCAAGATTTTCCTCCGAAAGCGCTGGGAAAACTTTTTTGAACTCAAAAGGAATCAAGATGAAGTCCTGATCCCTTTGATCGAAGCAAGAAGGAAGGCCATGCAAAACAGGAAACACAGAGCACAAAGGGAAGAAGAAGGTGAAGAATACGTGATGTCTTATGTGGATACGCTTCTCGAGTTGGAGCTCCCCGAGGAGAAGAGGAAGCTTACAGATGACGAAATAACCACGTTAGCCTCCGAGTTCCTAACCGGCGGCACAGATACCACAACCAAGGCCCTGGAATGGATAATGGCGAATTTAGTGAAATACCCAGAAATTCAAAACAAGCTTTATGCAAAGATCAAAGGAGTAATGGGAGATGGATCAGTGAGGGAGGAGGTGAAGGAAGAGGAATTGGGGAAAGTTGCATATTTGAAAGCTGTGGTTTTGGAAGGATTACGAAGACACCCACCAGGGCATTTCCTGTTACCACACGCAGTGAAAGAAGAAACAACATTGGAAAATTATTTGATACCAAAGAATGGGACAGTGAATTTCATGGTGGCAGAGATGGGTTGGGATCCGGAAGTGTGGGAAGATCCGATGGAGTTTAAGCCAGAGAGGTTCATGAAGGGCGGCAGCGGCAAAGAAGAAGAAGAAGAAGTGGCGTTTGATATAACAGAAAGCAAGGAGATAAAGATGATGCCGTTTGGAGCAGGAAGAAGGGTATGTCCAGGAGCTAGTCTTGCAATTCTTCATTTGGAATATTTCATTGCCAATTTGGTTTGGAGGTTTCAATGGAAGGCCTTCGACGGAGACGATGTTGATATGTCGGAGGGTAAGAAGGTGGACTTCACTGTGGTGATGAAAAAGCCTCTTAAAGCCATTATAATTTCGAGGTTTTAA | 1563 | 47.79 | MTVTWFIVVITITISLCLRSLLNSKFSTKLPPGPPSIPIISNIQWLCRSPLQTEFLLHNFIAKYGPIITLPIGTRPTIFIADRSIAHKALVLNGTLFADRPLALPVSKIVSSNQHNINTASYGPLWRVLRRNLTSQILHPSRVKSYGPARKWVLDILLNRFLSHSESGNPVCVVDHFQYAMFCLLVLMCFGDKLDESQIKEIEKMQRTMLMNLGRFNVLNFWPKLTKIFLRKRWENFFELKRNQDEVLIPLIEARRKAMQNRKHRAQREEEGEEYVMSYVDTLLELELPEEKRKLTDDEITTLASEFLTGGTDTTTKALEWIMANLVKYPEIQNKLYAKIKGVMGDGSVREEVKEEELGKVAYLKAVVLEGLRRHPPGHFLLPHAVKEETTLENYLIPKNGTVNFMVAEMGWDPEVWEDPMEFKPERFMKGGSGKEEEEEVAFDITESKEIKMMPFGAGRRVCPGASLAILHLEYFIANLVWRFQWKAFDGDDVDMSEGKKVDFTVVMKKPLKAIIISRF | 520 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 25362223 | 25364027 | + | Tan0015548.1 | Tan05g1453 | 752761 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan05g1453 | 520 | FunFam | Cytochrome P450 family protein | 24 | 520 | - | - | |
| Tan05g1453 | 520 | Gene3D | Cytochrome P450 | 23 | 520 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1453 | 520 | Pfam | Cytochrome P450 | 31 | 510 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1453 | 520 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 456 | 465 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan05g1453 | 520 | PRINTS | P450 superfamily signature | 310 | 327 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1453 | 520 | PRINTS | P450 superfamily signature | 463 | 474 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1453 | 520 | PRINTS | P450 superfamily signature | 454 | 463 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1453 | 520 | PRINTS | P450 superfamily signature | 366 | 377 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1453 | 520 | PRINTS | E-class P450 group I signature | 180 | 198 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1453 | 520 | PRINTS | E-class P450 group I signature | 453 | 463 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1453 | 520 | PRINTS | E-class P450 group I signature | 463 | 486 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1453 | 520 | PRINTS | E-class P450 group I signature | 365 | 383 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1453 | 520 | PRINTS | E-class P450 group I signature | 319 | 345 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1453 | 520 | PRINTS | E-class P450 group I signature | 299 | 316 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1453 | 520 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1453 | 520 | PRINTS | E-class P450 group I signature | 85 | 106 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1453 | 520 | SUPERFAMILY | Cytochrome P450 | 31 | 519 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1453 | 520 | CDD | CYP77_89 | 63 | 513 | - | - | |
| Tan05g1453 | 520 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 14 | 516 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan05g1453 | Tan-Chr5:25362223 | Tan05g1469 | Tan-Chr5:26259633 | 3.70E-237 | dispersed | |
| Tan05g1453 | Tan-Chr5:25362223 | Tan04g0679 | Tan-Chr4:5861871 | 2.90E-93 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan05g1453 | K24184 | - | csv:101204559 | 784.637 |