Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g1568 ATGAGCTCCCATTGGAACTGCAATATTCTTGCTTTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCAATCTCGTTGCAATGGACTGAATTTTGATGGGGTTCTCTTGCTTTCGTTTAAGTATGGCGTTTTGGAAGACCCTCTTTTTGTTCTTCAAAACTGGAATTACTCCGATGAGACTCCGTGTTCATGGCGGGGAGTCACCTGCGGCGGTGGGTCTAGAGTTACAGGTTTATCTCTACCGAATTCCCAGCTTATGGGCTCTGTTTCTTCTGATCTGGGTTTGATTGAAAACCTTCAATCTGTTGATCTGTCGAACAATTCCTTTAATGGGTCTCTTCCCTTGTCTCTCTTCAATGCCACAATGCTCCAGTTTCTTGATTTGTCCGAGAATTTGATCTCCGGCGAGGTTCCAGCGGCGGTGGCTCGACTTGGGAATCTGCAAGTTCTTAACCTCTCCGGCAATTCTCTGTTCGGCAAGTTTCCGAGTGATCTTGCGAATTTGGGGAATCTCACAGTTGTGTCTCTGAAGAACAATTACATTTCCGGTGAGATTCCCGGCGGGTTCAAAACGGTGGAGGTTTTGGATCTGTCTTTCAATTTGATTAATGGCTCTTTGCCGTCTGATTTTGGTGGCGACAGTTTACGTTACTTCAACATCTCGTACAACAGACTTTCCGGCGAAATCCCGCCGGATTTCGCCGATAAAATTCCGGCCAACGCAACAATTGATCTCTCCTTCAACAACCTCACTGGCGAAGTCCCTGTTTCCGACGTGTTCATGAACCAAGAAGCTAATTCCTTCACCGGAAACCGCCAACTCTGCGGTGAGTTAACAAATACCCCATGCCCAATTCCTTCATCGCCGGCGTCGCTCCCGCCGGCGATTGCCGCTATTCCAATAGACCCAAGTACCCCAGAAACCACCTCGCCAGAAAAACGGAGCGAAACAGGGTTCAAATCCTCTACCATCGTCGCCATTGTACTCGGCGACGTCGTCGGATTGGCAATTCTGTGTCTCCTCTTCTTTTACGTCTACCATTTGAAGAAAAAAAACAAAACCGTGGAAACCCATTTGAAAAACGAAGCCAATTTGGGCAAAGACAGCTGGTCCACATCGTCATCAGAATCCAGAGGGTTTTCGCGATGGTCCTGCCTGAGAAAAACAGAGGATCCGGAAGAGGGAAATTCCGATCGGGCGAGTATGGGGTCCGTGTCCGGGCACCGCGAGACGGTGGAGGAGGGCGGAGAGGGAAATAATAAGAGAGGGACTTTGGTGACGGTGGACGGCGGAGAAAAGGAGTTGGAACTAGAGACGCTGTTGAAGGCGTCGGCGTACATTCTCGGCGCCACCGGATCGAGCATAACGTACAAGGCGGTGCTGGAAGACGGGACGGCGTTTGCGGTGAGGAGAATCGGAGACGGGGGAGTTGAGAAGTATAAGGATTTCGAGAACCAGATTCGAGTTGTGGCTAAATTGGTTCACCCAAATTTGGTTCGTGTTCGTGGGTTTTATTGGGGCGTTGATGAGAAGCTCATTATTTATGATTTTGTTCCTAATGGTAGCCTTGCTAATGCTCGTTACAGGAAAATGGGCTCTTCGCCTTGTCATCTTCCATGGGAGGCCCGATTGAGAATCGCAAAAGGACTGGCCCGTGGGCTTTCTTATCTCCACGATAAGAAGCACGTCCATGCCAACTTGAGGCCCAGCAACATTCTTTTGGGCTATGACATGGAGCCCAAGATAGGGGATTTCGGCCTCGACAAGCTCGTATTCGGCGACTCCAGCTACAAAGCCGGTGGCTCGACTCGAAATTTCGGGAGCAAGAGGTCCACCGCATCGCGAGACAGCTTCCAAGACTACGTCACTGGACCAAGCCCTGGACCGAGCCCGAGCCCGAGCTCCATCAGTGGAGTATCGCCGTACCTAGCACCAGAATCGCTTCGGAGCCTGAAGCCGAACCCAAAGTGGGACGTGTACTCTTTTGGAGTGATATTGCTCGAGTTACTAACGGGAAAGATCGTGGTGTTGGATGAGTTGGCTCAAGGGCTTGGACTTGCAGTCGAAGACAAGAGTCGAGCCCTAAGGATGGCTGACATGGCAATTCGAGCTGACGTGGAGGGAAGAGAAGAGGCATTGTTGTCTTTCTTTAAATTAGGATATAGTTGCGCATCTCCTGCCCCACAAAAGAGACCATCCATGAAAGAAGCATTGCAAATTTTGGAGAAATTTCCTACCATATCCACGTCATCACACTATTTTGGTCTCTAG 2268 49.65 MSSHWNCNILALLLLLLLLLLQSRCNGLNFDGVLLLSFKYGVLEDPLFVLQNWNYSDETPCSWRGVTCGGGSRVTGLSLPNSQLMGSVSSDLGLIENLQSVDLSNNSFNGSLPLSLFNATMLQFLDLSENLISGEVPAAVARLGNLQVLNLSGNSLFGKFPSDLANLGNLTVVSLKNNYISGEIPGGFKTVEVLDLSFNLINGSLPSDFGGDSLRYFNISYNRLSGEIPPDFADKIPANATIDLSFNNLTGEVPVSDVFMNQEANSFTGNRQLCGELTNTPCPIPSSPASLPPAIAAIPIDPSTPETTSPEKRSETGFKSSTIVAIVLGDVVGLAILCLLFFYVYHLKKKNKTVETHLKNEANLGKDSWSTSSSESRGFSRWSCLRKTEDPEEGNSDRASMGSVSGHRETVEEGGEGNNKRGTLVTVDGGEKELELETLLKASAYILGATGSSITYKAVLEDGTAFAVRRIGDGGVEKYKDFENQIRVVAKLVHPNLVRVRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLRIAKGLARGLSYLHDKKHVHANLRPSNILLGYDMEPKIGDFGLDKLVFGDSSYKAGGSTRNFGSKRSTASRDSFQDYVTGPSPGPSPSPSSISGVSPYLAPESLRSLKPNPKWDVYSFGVILLELLTGKIVVLDELAQGLGLAVEDKSRALRMADMAIRADVEGREEALLSFFKLGYSCASPAPQKRPSMKEALQILEKFPTISTSSHYFGL 755
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 34985424 34989351 - Tan0013071.1 Tan05g1568 752876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g1568 755 MobiDBLite consensus disorder prediction 364 424 - -
Tan05g1568 755 SUPERFAMILY L domain-like 33 275 - -
Tan05g1568 755 PANTHER OS05G0588300 PROTEIN 189 744 IPR050994 -
Tan05g1568 755 FunFam Leucine-rich repeat receptor-like protein kinase 189 284 - -
Tan05g1568 755 CDD STKc_IRAK 447 743 - -
Tan05g1568 755 MobiDBLite consensus disorder prediction 602 638 - -
Tan05g1568 755 Pfam Protein kinase domain 447 738 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g1568 755 Pfam Leucine rich repeat 97 156 IPR001611 GO:0005515(InterPro)
Tan05g1568 755 MobiDBLite consensus disorder prediction 364 381 - -
Tan05g1568 755 ProSiteProfiles Protein kinase domain profile. 441 746 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g1568 755 Gene3D Transferase(Phosphotransferase) domain 1 517 751 - -
Tan05g1568 755 Gene3D Ribonuclease Inhibitor 29 189 IPR032675 -
Tan05g1568 755 Gene3D Ribonuclease Inhibitor 190 284 IPR032675 -
Tan05g1568 755 Pfam Leucine Rich Repeat 169 189 IPR001611 GO:0005515(InterPro)
Tan05g1568 755 Pfam Leucine Rich Repeat 213 233 IPR001611 GO:0005515(InterPro)
Tan05g1568 755 Pfam Leucine Rich Repeat 191 210 IPR001611 GO:0005515(InterPro)
Tan05g1568 755 Gene3D Phosphorylase Kinase; domain 1 416 516 - -
Tan05g1568 755 MobiDBLite consensus disorder prediction 602 624 - -
Tan05g1568 755 MobiDBLite consensus disorder prediction 382 396 - -
Tan05g1568 755 SUPERFAMILY Protein kinase-like (PK-like) 446 741 IPR011009 -
Tan05g1568 755 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Tan05g1568 755 FunFam Leucine-rich repeat receptor-like protein kinase 28 186 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g1568 Tan-Chr5:34985424 Tan11g1832 Tan-Chr11:21409204 3.40E-82 dispersed
Tan01g0676 Tan-Chr1:6427168 Tan05g1568 Tan-Chr5:34985424 9.30E-136 transposed
Tan04g2107 Tan-Chr4:76354713 Tan05g1568 Tan-Chr5:34985424 3.00E-12 transposed
Tan05g1568 Tan-Chr5:34985424 Tan06g1940 Tan-Chr6:59935346 6.00E-31 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67615 PF00069 Pkinase 1.60E-29 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g1568 - - - 0.0