Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g1578 ATGGAGTTTCTCTCTGGTTGCCTCCTACTTCTGGTCACTATAGTCCTTATTCTACAACAATTCGGAATCCGCCGGAGAAATCTACCGCCAAGTCCACCGTCGGTTCCGATCATCGGCCACTTCCACCTCATGAAACGGCCAACCCACCGCAATTTCCACAACATCGCCACCAAATACGGCCCCATTTTCACTCTCAGATTTGGATCTCACCTTGCACATGTAGTCTCTTCACTCCAAGTAGCCGAAGAATGCTTCACCAAAAACGACATCGTCTTCGCCAACCGCCCACGTTTGCTCCTCGGCAAACATCTCGGCTACAACCACACCACCATCGCCAACGCACCGTACGGCGACTACTGGCGGAACCTCCGCCGCATCGCCGCCACCGAGATCTTCTCCACGGCGCGGCAAAACTCATCTCTCAGCATCCGTAAAGACGAAATCCAACGCCTGTTACTCAAACTCCATTCCGAATCGTTCGCCAAGGTCGAGTTGAAATCAATGTTTTCAGAACTGACTTTCAACGTCATGATGAGAATCGTGGCTGGAAAGCGGTACTACGGCGAAGAGGTTTCCGATGAGGCGGAGGCGAGGGAGTTCAGAGAGGTTATGGCGGAGATTTCGGCTCATGGAGGAGCTTCGCATTGGGTTGATTTCATGCCGATTTTTCTGAAATGGATTGTGGGTTTTGGATTTGAGAAGAGTTTGGTGAGGCTGAGGAAGAGGACAGATCGATTTCTGCAGGCTTTGATTGAAGAACGGCGCAACAAGAAAGATTTAGAAAAACAGAGTACTCTGCTTGATCGTGTTCTGGAATTGCAGGCCTCCGAACCGGAAAATTACTCCGATCAGATCATCAAAGGGCTTGTTCTGGCATACACATTCTCGACTTGCCTCGTGAATTGCGAGGATTTCAGCATGATTCGAAAAAGTGGTTGTGATGGTCTGTTTCACTGA 957 49.84 MEFLSGCLLLLVTIVLILQQFGIRRRNLPPSPPSVPIIGHFHLMKRPTHRNFHNIATKYGPIFTLRFGSHLAHVVSSLQVAEECFTKNDIVFANRPRLLLGKHLGYNHTTIANAPYGDYWRNLRRIAATEIFSTARQNSSLSIRKDEIQRLLLKLHSESFAKVELKSMFSELTFNVMMRIVAGKRYYGEEVSDEAEAREFREVMAEISAHGGASHWVDFMPIFLKWIVGFGFEKSLVRLRKRTDRFLQALIEERRNKKDLEKQSTLLDRVLELQASEPENYSDQIIKGLVLAYTFSTCLVNCEDFSMIRKSGCDGLFH 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 36876420 36878393 + Tan0009806.1 Tan05g1578 752886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g1578 318 Gene3D Cytochrome P450 23 297 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan05g1578 318 SUPERFAMILY Cytochrome P450 29 293 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan05g1578 318 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan05g1578 318 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan05g1578 318 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan05g1578 318 PANTHER CYTOCHROME P450 82C3-RELATED 13 293 IPR050651 -
Tan05g1578 318 Pfam Cytochrome P450 29 291 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g1578 Tan-Chr5:36876420 Tan05g1584 Tan-Chr5:37678065 6.40E-75 dispersed
Tan05g1578 Tan-Chr5:36876420 Tan05g1583 Tan-Chr5:37152090 4.20E-119 proximal
Tan01g4718 Tan-Chr1:113047462 Tan05g1578 Tan-Chr5:36876420 1.80E-61 wgd
Tan03g1601 Tan-Chr3:72245494 Tan05g1578 Tan-Chr5:36876420 3.30E-86 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g1578 K13260 - csv:101210967 400.208