Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g1579 ATGACTGAACTACTCAACAATCCGGAGGTGCTAAATAAAGCCATGGTCGAGTTGGACACAATAGTTGGTCAAGATCGTCTCATCAACGAAGTAGATCTCACTAGTCTCAATTATCTTCAAGCCATTGTTTTCGAGACACTTCGCTTGCACCCAGCTGCTCCGATGCTCCTCCCACATTATTCCTCCGACAACTGTACCGTCGCTGGCTATGACATTCCACGTGGCACAATGTTGTTGGTCAATGCATGGGCGATACATAGAGACCCGAAGCTTTGGGACGACCCAACGAGGTTTCGACCAGAGAGGTTTTTGGGATCAAGAAATGAGTGCCAATTGAATAAACTGATTGCTTTTGGGCTTGGAAGGAGGGCTTGTCCTGGTGCAATTATGGCTAAAAGTTTTGTCGGATTGACTTTAGGGCTATTGATTCAGTGTTATGAGTGGAAAAAGACTGGAGATGAAGAGATGGATATGACTGAAACTGGGGGTACTACTGCTCACAAAGTGAAGCCTTTGGAAGCCATGTGCAAAGCTCGCCCTATCATGAGCAAAGTTTTCTTCAAATTTCACCAGGGTTTTATATAA 585 44.96 MTELLNNPEVLNKAMVELDTIVGQDRLINEVDLTSLNYLQAIVFETLRLHPAAPMLLPHYSSDNCTVAGYDIPRGTMLLVNAWAIHRDPKLWDDPTRFRPERFLGSRNECQLNKLIAFGLGRRACPGAIMAKSFVGLTLGLLIQCYEWKKTGDEEMDMTETGGTTAHKVKPLEAMCKARPIMSKVFFKFHQGFI 194
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 36908940 36909868 + Tan0017433.1 Tan05g1579 752887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g1579 194 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 118 127 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Tan05g1579 194 SUPERFAMILY Cytochrome P450 1 179 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan05g1579 194 PRINTS E-class P450 group I signature 115 125 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan05g1579 194 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan05g1579 194 PRINTS E-class P450 group I signature 125 148 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan05g1579 194 PRINTS E-class P450 group I signature 81 105 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan05g1579 194 PANTHER CYTOCHROME P450 82C3-RELATED 1 179 IPR050651 -
Tan05g1579 194 Pfam Cytochrome P450 2 161 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan05g1579 194 Gene3D Cytochrome P450 1 181 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan05g1579 194 PRINTS P450 superfamily signature 116 125 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan05g1579 194 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan05g1579 194 PRINTS P450 superfamily signature 41 52 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g1579 Tan-Chr5:36908940 Tan03g1603 Tan-Chr3:72272251 1.40E-64 dispersed
Tan05g1579 Tan-Chr5:36908940 Tan05g1583 Tan-Chr5:37152090 1.40E-77 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g1579 K13260 - csv:101210967 275.789