Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan05g1587 | ATGGATATTCTCTTCCTTTCCATTTCTCTATCTCTATTCTCTGTCCTTCTTGCCTTCACCTTTCTTCTTCGACCTCCCCGCCAAAACCTTCCACCAAGCCCACTTTTTTGTCTTCCAATTATAGGCCATCTCCATCTCATCAAACATCCAGTCCATCGAATCCTTCACAACCTCTCCCAAAAGTATGGTGATGTTTTCTCTCTTCGATTTGGTTCACGTCTCGTCGTAGTTGTATCATCTCCTTCCGTTGTCCAAGAATGCTTTACGAAGAACGATATTGTTCTTGCAAATCGACCATTTTTGGGCAGTGGAAAGCACTTAGCTTACAACCATACAACCATGGCGCTCGCCCCTTACGGCAAATATTGGCGAAACCTTCGTCGAATTGGCACCCTCGAGATCTTCTCCACGAGTCGACTAAATCTGTTCTTGGGAGTTCGAGAGTATGAAGTTAAGCGTTTGATGCGTAGATTATGTGGGAATTCGTTGGATGAATTCACGCTAGTGGAGCCGGAGTCTATGTTTTTAGATCTTATGTACAATGTTATTATGAGAATGATGGCTGGTAAGCAACTTTATGAAGATGGGAAGGGAAAATCGAGAGAATTTAGAGAGATGGTGACACAGATTATGGCTCATGGTGGGACAACAAATCCAGGAGACTTCATACCCATATGGAATTGGATTGATCCGAGTGGTTTCGAGAAGAAGATAATGAAGCTCGGACGCACAATGGATGAACTTCTCCAAGAATTGGTTGATGGGATAAGGAATCACAAAGGTGAAGGGAACAACACTATGATTGATCGTTTGCTACATTTGCAGAAAACTGAACCTGAAAATCACAGTGACCAAATTATCAAAGGCCTTATACAAATCATATTAGTAGCAGGAATTGACACAACTGCAATAACTTTAGAATGGGCGCTCTCTCATCTACTCAACAACCTAGATGTGTTAGAGAAAGCAAAAGCTGAGATAGACAGTTTTGTTGGACAAGAGCGTTTGGTCAATGAAGCTGATTTGTCAAATTTGAATTATGTACAAGGAATCCTTAATGAGACTCTACGACTGAACCCAGCAGCTCCTTTGCTTGTCCCACATTGCCCTTTTGAAGATTGTAAAATTGGAGGTTATGATGTACCACGTGACACAATTGTATTGATTAATGCTTGGGCTATTCATAGAGATCCAAACCTATGGGAAGATGCCACCAGTTTTAAGCCTGAAAGACATATGAATCCGATTGGATCAGTTGATTCTTATAAACTATTGCCATTTGGATTGGGGAGGAGAGCATGCCCTGGAATGGAAATAGCTAAACGAGTGGCTACCTTGACTTTGGCATCGCTGATTCAATGTTTTGAGTGGAAAAGAGAGGGCATTTCATTGGTTGATATGAGTGAAGGGGAAGGGGTTACTATGCCGAAAGCTCAACCTTTGGTAGCCAAATGTAAACCTCGCCCTATCATGAAAGCTATTTTTACCGATGCAATTGATCACAATTATTTGAAAATGGACACTTCTGAAACTGGAAATACAATGCGAGTATGA | 1554 | 41.51 | MDILFLSISLSLFSVLLAFTFLLRPPRQNLPPSPLFCLPIIGHLHLIKHPVHRILHNLSQKYGDVFSLRFGSRLVVVVSSPSVVQECFTKNDIVLANRPFLGSGKHLAYNHTTMALAPYGKYWRNLRRIGTLEIFSTSRLNLFLGVREYEVKRLMRRLCGNSLDEFTLVEPESMFLDLMYNVIMRMMAGKQLYEDGKGKSREFREMVTQIMAHGGTTNPGDFIPIWNWIDPSGFEKKIMKLGRTMDELLQELVDGIRNHKGEGNNTMIDRLLHLQKTEPENHSDQIIKGLIQIILVAGIDTTAITLEWALSHLLNNLDVLEKAKAEIDSFVGQERLVNEADLSNLNYVQGILNETLRLNPAAPLLVPHCPFEDCKIGGYDVPRDTIVLINAWAIHRDPNLWEDATSFKPERHMNPIGSVDSYKLLPFGLGRRACPGMEIAKRVATLTLASLIQCFEWKREGISLVDMSEGEGVTMPKAQPLVAKCKPRPIMKAIFTDAIDHNYLKMDTSETGNTMRV | 517 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 37990718 | 37992352 | + | Tan0010942.1 | Tan05g1587 | 752895 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan05g1587 | 517 | Pfam | Cytochrome P450 | 32 | 478 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1587 | 517 | Gene3D | Cytochrome P450 | 23 | 490 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1587 | 517 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 427 | 436 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan05g1587 | 517 | PANTHER | CYTOCHROME P450 82C3-RELATED | 15 | 488 | IPR050651 | - | |
| Tan05g1587 | 517 | FunFam | Cytochrome P450 family protein | 23 | 491 | - | - | |
| Tan05g1587 | 517 | SUPERFAMILY | Cytochrome P450 | 31 | 488 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1587 | 517 | PRINTS | P450 superfamily signature | 425 | 434 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1587 | 517 | PRINTS | P450 superfamily signature | 297 | 314 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1587 | 517 | PRINTS | P450 superfamily signature | 434 | 445 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1587 | 517 | PRINTS | P450 superfamily signature | 350 | 361 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1587 | 517 | PRINTS | E-class P450 group I signature | 83 | 104 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1587 | 517 | PRINTS | E-class P450 group I signature | 286 | 303 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1587 | 517 | PRINTS | E-class P450 group I signature | 306 | 332 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1587 | 517 | PRINTS | E-class P450 group I signature | 434 | 457 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1587 | 517 | PRINTS | E-class P450 group I signature | 178 | 196 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1587 | 517 | PRINTS | E-class P450 group I signature | 424 | 434 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1587 | 517 | PRINTS | E-class P450 group I signature | 59 | 78 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1587 | 517 | PRINTS | E-class P450 group I signature | 349 | 367 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1587 | 517 | PRINTS | E-class P450 group I signature | 390 | 414 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1587 | 517 | CDD | CYP81 | 63 | 481 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan05g1584 | Tan-Chr5:37678065 | Tan05g1587 | Tan-Chr5:37990718 | 7.20E-294 | dispersed | |
| Tan05g1587 | Tan-Chr5:37990718 | Tan05g1591 | Tan-Chr5:38367440 | 8.40E-226 | dispersed | |
| Tan05g1586 | Tan-Chr5:37726738 | Tan05g1587 | Tan-Chr5:37990718 | 1.10E-201 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan05g1587 | K13260 | - | csv:101204413 | 790.03 |