Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan05g1592 | ATGGATTTTGATCTTTGGCTTTGTATTTTGCTCTCCATTGTCTCTTTCCTTCTTGGCTACACCTTTCTACTGCAACCTCATCGTCGGAGCCTCCCACCAAGCCCACCTTTTTCTGTTCCATTAATAGGCCATCTCCATCTTCTCAAACATCCAGTCCATCAAACATTTCACAAGCTCTCCCAAAAATACGGCCATGTCTTCTCTCTCAAATTTGGTTCACGTCTTGTTGTAGTTTTATCTTCTCCTTCAGCTGTTCAAGAATGCTTTACAAACAACGATATCATTCTTGCAAATCGCCCATTGTTGAACACTGGAAAGTACTTAGCATACAACAATACCACCATGGCCATGATTTTCTCCACGACCCGCCTTAATTCCTTCTTGGGAATTCGAGAAGATGAAGTCAAACGTTTGATGCGAAAATTATGTGGCGATTCGATTCAAGAGTTTAGGGTAGTGGAATTGGAGCCGATGTTGTTAGATCTTACGTTTAATATTGTTATGAGAATGGTGGCTGGAAAGAAGTTTTATGAAGAGAATGTGTTGGATGATGATGAGGGTTATTCTAAAAGATTTAGAGACTTGGTGACACAAATTATGGCTCATGGTGGGTCAACGAATCCAGGTGATTTCATACCCTTGTCAACTGGTTTCGAGAAGAGGGTAATGAAGCTTGGAAACAAATTTGATGTACTTCTTCAAGAATTAATTGATGAGATTCGGATTAAAAAAGATGGAGGAAACACTATGATTCACCATTTACTTCCTGAAGTTTTTAGTGACCAAGTTATCAAAGGTCTAATACAAGGTATATTATTAGCAGGGATTGACTCAACCGCGGTGACTTTAGAATGGGCTCTATCTCATTTACTTAACAATCCAGACGTCTTGAAGAGGGCCACAACTGAGATAGATTGTTCCATTGGACAAGAGCGTATGGTTAATGAAGTTGATTTATCGAGTTTGAGTTACTTGCAAGGAATAATCTCTGAGACTCTACGGCTAAGCCCGGCTGGTCCTTTGCTTGTGCCACACTACGCATCTGAAGACTGCAAAATAGAAGGTTATGATGTTCCACGTGAAACAATCGTATTGATTAATGCTTGGGCTATACATAGAGATCCAAATCTATGGGAAGATGCTACTAGTTTTAAACCTGAAAGACATGTGAATAGTGTTAGATTTGATTCGTACAAACTATTACCATTTGGTTTGGGGAGAAGAGCATGTCCTGGCATGGGAATGGCTCAACGTGTGGTTGGCTTGACTTTGGCATCATTGATTCAATGTTTTGAGTGGAAAAGAGTGAGCAACTTATTGGTTGACATGAGGGAAGGTAAAGGGCTCACTATGCCCAAAGCTGAGTCATTAGTAGCCAAGTGTAGATCGCGCCCAATCATGAAAGCTATTCTTAGCAGAACAATTGCCCATACTTGA | 1437 | 40.43 | MDFDLWLCILLSIVSFLLGYTFLLQPHRRSLPPSPPFSVPLIGHLHLLKHPVHQTFHKLSQKYGHVFSLKFGSRLVVVLSSPSAVQECFTNNDIILANRPLLNTGKYLAYNNTTMAMIFSTTRLNSFLGIREDEVKRLMRKLCGDSIQEFRVVELEPMLLDLTFNIVMRMVAGKKFYEENVLDDDEGYSKRFRDLVTQIMAHGGSTNPGDFIPLSTGFEKRVMKLGNKFDVLLQELIDEIRIKKDGGNTMIHHLLPEVFSDQVIKGLIQGILLAGIDSTAVTLEWALSHLLNNPDVLKRATTEIDCSIGQERMVNEVDLSSLSYLQGIISETLRLSPAGPLLVPHYASEDCKIEGYDVPRETIVLINAWAIHRDPNLWEDATSFKPERHVNSVRFDSYKLLPFGLGRRACPGMGMAQRVVGLTLASLIQCFEWKRVSNLLVDMREGKGLTMPKAESLVAKCRSRPIMKAILSRTIAHT | 478 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 38488834 | 38490508 | + | Tan0019242.1 | Tan05g1592 | 752900 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan05g1592 | 478 | SUPERFAMILY | Cytochrome P450 | 32 | 464 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1592 | 478 | PRINTS | E-class P450 group I signature | 410 | 433 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1592 | 478 | PRINTS | E-class P450 group I signature | 400 | 410 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1592 | 478 | PRINTS | E-class P450 group I signature | 367 | 391 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1592 | 478 | PRINTS | E-class P450 group I signature | 84 | 105 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1592 | 478 | PRINTS | E-class P450 group I signature | 162 | 180 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1592 | 478 | PRINTS | E-class P450 group I signature | 263 | 280 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1592 | 478 | PRINTS | E-class P450 group I signature | 60 | 79 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1592 | 478 | PRINTS | E-class P450 group I signature | 326 | 344 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1592 | 478 | PRINTS | E-class P450 group I signature | 283 | 309 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1592 | 478 | PANTHER | CYTOCHROME P450 82C3-RELATED | 17 | 464 | IPR050651 | - | |
| Tan05g1592 | 478 | Pfam | Cytochrome P450 | 33 | 452 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1592 | 478 | CDD | CYP81 | 64 | 457 | - | - | |
| Tan05g1592 | 478 | Gene3D | Cytochrome P450 | 24 | 468 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1592 | 478 | PRINTS | P450 superfamily signature | 410 | 421 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1592 | 478 | PRINTS | P450 superfamily signature | 274 | 291 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1592 | 478 | PRINTS | P450 superfamily signature | 327 | 338 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1592 | 478 | PRINTS | P450 superfamily signature | 401 | 410 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g1592 | 478 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 403 | 412 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan05g1592 | Tan-Chr5:38488834 | Tan06g1420 | Tan-Chr6:18554938 | 1.00E-132 | dispersed | |
| Tan05g1591 | Tan-Chr5:38367440 | Tan05g1592 | Tan-Chr5:38488834 | 4.40E-203 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan05g1592 | K13260 | - | csv:101205626 | 682.945 |