Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g1626 ATGGTCAGCCTAGCCGAAGCCCGATCTCTTCAAAATGCCCTAGCCATGGTCGAAGGCGTCAAACGAGCACTCGTCGCTTCCGGCATCGAAGAGGCCAAAGTCCTCTTCGATCCAAAATTGACCACCGAAGCTCAAATCCTCGCTGCAATCGACAATTGCGGCTTCGAAGCCGAGGTCATCTCTGCCGCGGACGAAGCCTACGAAGTTCACATAAAACTCGAACGGGTTGGCCCTGCGGACATGGCCGCCATAAGATCCACTCTCGAGGAAGCTTCTGGAGTGAACTCTGTTGAAATGGACGGGCTAGGGCAGATGGTTTCCATCGGCTATGACCCTGACCGGACTGGTCCGAGGTATCTTATGCAGTGCCTCGAGAGCTACGGGGCGAGATTGTATGTGCCGCCGAAAAGAAGAGATGTGGAGCAGCTTCAAGAAGCTTCTACTTATAGGAACTTGTTCTTGCTGAGCTGCTTGTTTGCTGTTCCAGTGGTGGCTTTTGCAATGGTGTTTCCTATGCTTCCTCCTTATGGAGAGTGGTTGAATTATAGGGTTTGCAATATGCTTACTGTTGGAATGGTTCTTAAATGGATCTTCTGCACACCAGTCCAGTTACTTGCCGGGTGGAGATTTTATGTAGAATCATACCGTGCATTACAACAGAAATCTGCAAATATGGATGTTTTGGTTGCTGTAGGCACCAATGCAGCTTACTTTTACTCAGTATACATAGTGTTTAAAGCATCCACTTCCAACTCTTTTAGAGGGAAAGATTTCTTTGAGTTTAGCTCCTTGTTGATCTCCTTCATTCTACTTGGAAAATATTTGGAGGTCATGGCCAAGGGCAAATCATCAGATGCTTTAGCAAAGCTTGCTCATCTTGCTCCTGATACAGCTTGTTTGGTGACCTTCGATGATCGTGGAAATTTGCTATCAGAGATGGAGATTGATACCCAGCTGATACAGAGGAATGATATAATTAAGATTGTTCTTGGGGCAAAAGTTCCTGTTGATGGGATTGTTATTAGTGGTGAAAGCAATGTGAATGAGAGTACAATTACTGGAGAAGCAAGATCCATTCCAAAAACACCCGGGGACAAGGTTATTGGCGGGTCTGTCAATGAAAATGGATGCTTATTTGTTAAGACCACTCATGTTGGATCTGATACTACACTTTCTCGAATTGTAAAACTCGTCGAATCAGCTCAGCTATCACGAGCACCAGCTCAAAAATTGGCAGATCGGATATCCAAGTTTTTTGTTCCTGTTGTTGTTGTGGCAGCATTTATGACATGGCTTGGATGGTTAATTTGTGGAGAAGCTGGTTTATACCCTAAACATTGGATACCAAGAGGCATGGATGAGTTTGAACTTGCACTGCAGTTTGGAATTTCAGTGCTGGTGATTGCATGCCCATGTGCCCTTGGTTTAGCAACACCAACTGCAATCATGGTTGCATCCGCGAAGGGTGCTTCTCTAGGTGTGCTCATTAAGGGAGCAAGTGCACTTCAAAATGCATACAAGGTGAAAATGGTAGCTTTTGACAAGACTGGGACTCTAACAGTTGGCAGGCCAGAGGTAGTTAGCGTTGTGCTTTTTTCTACATTTTCAATGCAGGAGCTCTGTGATGTAGCGATTGCAATCGAGTCAAACAGCAAACACCCTTTTGCAAAATCTGTAGTGGAGCATGCAAAGAAAATGAAAAGGAAGTTTGGGGCCCGGAACGAATGTCACAAATGCATCCAGAACTTCGAGGTGTTCCCGGGAAGAGGGGTTGGAGGAAAAATTGATAGCAAGCCAGTTTTAGTAGGAAACAAAAGGCTCATTGAAGCTCACAAGATTTTTACTGGTCCTCATGTTGATCGTTACGTTATAGAAAATGAGCGGCTGGCCCAAACATGTATCTTAGTGGCTATTGATGGCAGAGTAGCAGGAGGTTTTGGTGTTGTAGATCCGCCAAAGCCTGGGGCTAAAGCTGTCATATCGTATCTTCGCTCAATCGGCATCTCAAGCATAATGGTCACTGGTGATAACTTGGCCACGGCATTTGCTGTTGCAAGAGGGGTTGGGATCAAGGATGTCTTTGCAGAGATGGATCCAATTGAAAAAGCTAACCAAATTAAATCCTTAAAGACGGCAGGGAATATCGTGGCAATGGTGGGAGATGGAGTAAATGATTCACATGCCTTAGCTGCAGCTGATGTTGGCATTGCCATTGGTGCTGGAACAAATATTGGTATAGAAGCAGCAGATATAGTTCTCATGCGAAGCCATTTAGAAGATGTAGTTACAGCCATAGATCTCTCAAGACAAACGGTTTATCGTATATGGCTTAACTACATCTGGGCTCTTGGCTATAATATCGTTGGTATGCCTATTGCTGCCGGAATCTTATATCCCTTCACTGGAATCCGATTGCCACCGTGGCTCGCCGGTGCCTGCATGGCTGCTTCCTCCCTTAGTGTCGTATGTTCTTCTCTCTTATTGAAATGCTATAAGAGACCCTTGAATTTTCAATCCACTTGA 2523 45.14 MVSLAEARSLQNALAMVEGVKRALVASGIEEAKVLFDPKLTTEAQILAAIDNCGFEAEVISAADEAYEVHIKLERVGPADMAAIRSTLEEASGVNSVEMDGLGQMVSIGYDPDRTGPRYLMQCLESYGARLYVPPKRRDVEQLQEASTYRNLFLLSCLFAVPVVAFAMVFPMLPPYGEWLNYRVCNMLTVGMVLKWIFCTPVQLLAGWRFYVESYRALQQKSANMDVLVAVGTNAAYFYSVYIVFKASTSNSFRGKDFFEFSSLLISFILLGKYLEVMAKGKSSDALAKLAHLAPDTACLVTFDDRGNLLSEMEIDTQLIQRNDIIKIVLGAKVPVDGIVISGESNVNESTITGEARSIPKTPGDKVIGGSVNENGCLFVKTTHVGSDTTLSRIVKLVESAQLSRAPAQKLADRISKFFVPVVVVAAFMTWLGWLICGEAGLYPKHWIPRGMDEFELALQFGISVLVIACPCALGLATPTAIMVASAKGASLGVLIKGASALQNAYKVKMVAFDKTGTLTVGRPEVVSVVLFSTFSMQELCDVAIAIESNSKHPFAKSVVEHAKKMKRKFGARNECHKCIQNFEVFPGRGVGGKIDSKPVLVGNKRLIEAHKIFTGPHVDRYVIENERLAQTCILVAIDGRVAGGFGVVDPPKPGAKAVISYLRSIGISSIMVTGDNLATAFAVARGVGIKDVFAEMDPIEKANQIKSLKTAGNIVAMVGDGVNDSHALAAADVGIAIGAGTNIGIEAADIVLMRSHLEDVVTAIDLSRQTVYRIWLNYIWALGYNIVGMPIAAGILYPFTGIRLPPWLAGACMAASSLSVVCSSLLLKCYKRPLNFQST 840
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 41665654 41671978 - Tan0004599.1 Tan05g1626 752934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g1626 840 Gene3D - 504 769 IPR023214 -
Tan05g1626 840 SFLD p-type atpase 494 771 IPR044492 -
Tan05g1626 840 CDD P-type_ATPase_Cu-like 153 815 - -
Tan05g1626 840 Pfam E1-E2 ATPase 311 490 - -
Tan05g1626 840 ProSitePatterns E1-E2 ATPases phosphorylation site. 514 520 IPR018303 -
Tan05g1626 840 SUPERFAMILY HAD-like 510 825 IPR036412 -
Tan05g1626 840 Gene3D - 280 402 - -
Tan05g1626 840 PRINTS Copper-transporting ATPase signature 282 300 - -
Tan05g1626 840 PRINTS Copper-transporting ATPase signature 792 806 - -
Tan05g1626 840 PRINTS Copper-transporting ATPase signature 210 229 - -
Tan05g1626 840 PRINTS Copper-transporting ATPase signature 696 713 - -
Tan05g1626 840 PRINTS Copper-transporting ATPase signature 262 281 - -
Tan05g1626 840 PRINTS Copper-transporting ATPase signature 421 435 - -
Tan05g1626 840 Gene3D - 4 65 - -
Tan05g1626 840 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 7 836 - -
Tan05g1626 840 SUPERFAMILY HMA, heavy metal-associated domain 5 62 IPR036163 GO:0046872(InterPro)
Tan05g1626 840 PRINTS P-type cation-transporting ATPase superfamily signature 512 526 - -
Tan05g1626 840 PRINTS P-type cation-transporting ATPase superfamily signature 742 754 - -
Tan05g1626 840 PRINTS P-type cation-transporting ATPase superfamily signature 348 362 - -
Tan05g1626 840 PRINTS P-type cation-transporting ATPase superfamily signature 666 676 - -
Tan05g1626 840 PRINTS P-type cation-transporting ATPase superfamily signature 644 655 - -
Tan05g1626 840 PRINTS P-type cation-transporting ATPase superfamily signature 719 738 - -
Tan05g1626 840 PRINTS Copper-transporting ATPase 1 signature 208 233 - -
Tan05g1626 840 PRINTS Copper-transporting ATPase 1 signature 48 68 - -
Tan05g1626 840 PRINTS Copper-transporting ATPase 1 signature 19 42 - -
Tan05g1626 840 PRINTS Copper-transporting ATPase 1 signature 188 208 - -
Tan05g1626 840 PRINTS Copper-transporting ATPase 1 signature 153 174 - -
Tan05g1626 840 SUPERFAMILY Calcium ATPase, transduction domain A 312 398 IPR008250 -
Tan05g1626 840 CDD HMA 7 58 IPR006121 GO:0046872(InterPro)
Tan05g1626 840 NCBIfam HAD-IC family P-type ATPase 618 796 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan05g1626 840 NCBIfam HAD-IC family P-type ATPase 265 553 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan05g1626 840 SUPERFAMILY HMA, heavy metal-associated domain 79 133 IPR036163 GO:0046872(InterPro)
Tan05g1626 840 Gene3D - 523 652 IPR023299 GO:0000166(InterPro)
Tan05g1626 840 FunFam Copper-transporting ATPase 1, putative 280 402 - -
Tan05g1626 840 Pfam haloacid dehalogenase-like hydrolase 508 733 - -
Tan05g1626 840 NCBIfam heavy metal translocating P-type ATPase 225 828 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
Tan05g1626 840 SUPERFAMILY Calcium ATPase, transmembrane domain M 264 506 IPR023298 -
Tan05g1626 840 ProSiteProfiles Heavy-metal-associated domain profile. 1 58 IPR006121 GO:0046872(InterPro)
Tan05g1626 840 SFLD Haloacid Dehalogenase 494 771 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g1626 Tan-Chr5:41665654 Tan07g1662 Tan-Chr7:67982549 1.70E-244 dispersed
Tan05g1626 Tan-Chr5:41665654 Tan08g0866 Tan-Chr8:10975454 4.00E-68 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g1626 K17686 - csv:101214276 1343.18