Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g1635 | ATGTTGTTGAATTTGATGATCCCCCAACAGGCGGATTTGACACTGCTCATTCAGCTGCTCGGTGAGCCTCCGATTTTAATGTGTTTTTGGTTTGTCTCTCTTCTTGAACTCAAACTGCAAATCAACATGAGGAAATTCTTCTGCAGAGCTTATGATAGGGCGGCTATAAAGTTTCGAGGAACAGAGGCAGACATAAACTTCAGCATTGAAGACTACGAGGAGGATTTGAAGCAGATGGGAAATTTGACTAAGGAAGAATTTGTGCATGTTCTTCGCAAACAAAGCACAGGTTATCCGAGAGGAAGCTCGAAATTCAGAGGTGTAACATTGCATAAATGTGGAAGATGGGAGGCTCGGATGGGCCAGTTTTTAGGCAAAAAGTACGTATATCTGGGGTTGTTCGATTCTGAGATCGAAGCTGCGAGGGCTTATGACAAAGCTGCAATCAAGTGTAATGGCAAAGAAGCTGTCACAAACTTTGATCCCAGCATATATGAGAATGAGCTTAGTACAACAGAATCATCATCAGGCAAAGTCTTGGAACAGAATCTTGATTTGAGGTTGGGAAATTCAAGCTCAAAACAAAACACCCTTTCATTTGGGAATCATTGCCCAAATGCCACCGATAAAAGTGATTTGCAAAATAAGGAATCTAACCCTCAGGAATCAAATATATTTGAGAATGATAATGGTAGAAGATGTACATTCCTTCAAACAGAGAACATGCAATTTTGTAGCGAAACGATCGTTCGGTCTCCACCCTCTATCGATACGACGATACATGGGCACTTGGAGACACCTGTGGAATTGCAGACTCTTCACAATTACTCTCCACACTTCAATCAATCAAACTCTCAAATTGAGTTGTTAAGCAGCAGCAATGGAGGGTTAGGAAGTGATGAACTTTCACTGTGTTTGAGTGAAGGCCACCAATGGCAGCAATCTGGTGGCTCTCAACAATTTGCAACTGCTGCAGCATCATCAGGATTCCCACAAATTCAAATTTCAACTTCCCCAAATTGGCTGCAGAAAAATAATGCATGTTTCTTAGAGAGGCCCTCTTGA | 1065 | 41.88 | MLLNLMIPQQADLTLLIQLLGEPPILMCFWFVSLLELKLQINMRKFFCRAYDRAAIKFRGTEADINFSIEDYEEDLKQMGNLTKEEFVHVLRKQSTGYPRGSSKFRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKCNGKEAVTNFDPSIYENELSTTESSSGKVLEQNLDLRLGNSSSKQNTLSFGNHCPNATDKSDLQNKESNPQESNIFENDNGRRCTFLQTENMQFCSETIVRSPPSIDTTIHGHLETPVELQTLHNYSPHFNQSNSQIELLSSSNGGLGSDELSLCLSEGHQWQQSGGSQQFATAAASSGFPQIQISTSPNWLQKNNACFLERPS | 354 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 42524991 | 42527470 | - | Tan0016407.3 | Tan05g1635 | 752943 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g1635 | 354 | Gene3D | AP2/ERF domain | 47 | 70 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan05g1635 | 354 | Gene3D | AP2/ERF domain | 103 | 162 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan05g1635 | 354 | CDD | AP2 | 103 | 163 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan05g1635 | 354 | FunFam | AP2-like ethylene-responsive transcription factor | 103 | 163 | - | - | |
Tan05g1635 | 354 | PRINTS | Ethylene responsive element binding protein signature | 143 | 163 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan05g1635 | 354 | PRINTS | Ethylene responsive element binding protein signature | 105 | 116 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan05g1635 | 354 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 49 | 230 | - | - | |
Tan05g1635 | 354 | SMART | rav1_2 | 104 | 167 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan05g1635 | 354 | Pfam | AP2 domain | 103 | 153 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan05g1635 | 354 | MobiDBLite | consensus disorder prediction | 191 | 230 | - | - | |
Tan05g1635 | 354 | SUPERFAMILY | DNA-binding domain | 103 | 163 | IPR016177 | GO:0003677(InterPro) | |
Tan05g1635 | 354 | ProSiteProfiles | AP2/ERF domain profile. | 104 | 161 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan05g1633 | Tan-Chr5:42524991 | Tan05g1635 | Tan-Chr5:42524991 | 1.10E-174 | dispersed | |
Tan05g1635 | Tan-Chr5:42524991 | Tan08g1929 | Tan-Chr8:71547037 | 4.60E-58 | dispersed | |
Tan05g1634 | Tan-Chr5:42524991 | Tan05g1635 | Tan-Chr5:42524991 | 2.90E-136 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27516 | PF00847 | AP2 | 1.30E-09 | CL0081 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g1635 | K09284 | - | csv:101208665 | 474.552 |