Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g1654 ATGGGAGGAAGTAGTTTTGTCGTGTTTTTTGTTATTGTTTTGACATCGTTGTTGGCGATGTCGGAGGCGCAGCTCCGGCGAGATTTCTACGCCGATGTGTGCCCTAACGTGGAGAGCATTGTCCGAAGCGCCGTCACCAAGAAGTTCAAGCAGACTTTCGTCACAGTTCCCGCCACTCTCCGCCTCTTCTTCCATGACTGTTTTGTTCAGGGTTGTGATGCGTCTGTAATGATTGCTTCGAACGGAGGAGGTAACACGGCAGAGAAGGATCATCCTGATAATCTTTCATTGGCTGGAGATGGATTCGACACAGTGATCAAAGCCAAAGCAGCTGTTGATGCTGTGCCAGGATGTAGAAATAAAGTCTCTTGTGCGGATATTCTTGTGATGGCTACTCGAGATGTCATTTCATTGGCACGAGGGCCTTCCTATGCGGTGGAGCTTGGGAGAAAAGATGGGCTTGTTTCAAGAGCTTCAGATGTTGATGGGAAATTGCCTCAGCCAACCTTTAATCTCAATCAGCTCAATGCCATGTTTGCTGCCAATGGTCTTTCCCAAACTGACATGATTGCTCTCTCTGCTGCTCACACGGTAGGATTCTCCCACTGTGGGAAGTTTGCAAACAGAATCTACAATTTCAGCCGTACAAACCCAGTAGATCCAACGCTAAACCAAGCATACGCAGCCAAGCTCCAAGGCATGTGTCCGAGAGACGTGGATCCAAGGATAGCCATAGACATGGATCCAAACACCCCCAGAAGGTTCGACAACGTGTACTTCAAGAACCTGCAGCAAGGAATGGGCCTTTTCACTTCCGACCAAGTTCTCTTCACTGACTCAAGGTCCAGGCCCACTGTCAACGTTTGGGCCCATAGTGGCCAGACCTTCTACAACGCCTTCATTGATGCCATGACCAAGTTGGGCCGGGTCGGAGTCAAAACCGGATCCGATGGAAACATTCGCACTGACTGTGGCGTTTTCAACAGTTAA 990 49.29 MGGSSFVVFFVIVLTSLLAMSEAQLRRDFYADVCPNVESIVRSAVTKKFKQTFVTVPATLRLFFHDCFVQGCDASVMIASNGGGNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPGCRNKVSCADILVMATRDVISLARGPSYAVELGRKDGLVSRASDVDGKLPQPTFNLNQLNAMFAANGLSQTDMIALSAAHTVGFSHCGKFANRIYNFSRTNPVDPTLNQAYAAKLQGMCPRDVDPRIAIDMDPNTPRRFDNVYFKNLQQGMGLFTSDQVLFTDSRSRPTVNVWAHSGQTFYNAFIDAMTKLGRVGVKTGSDGNIRTDCGVFNS 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 45181190 45184074 + Tan0010621.1 Tan05g1654 752962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g1654 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Tan05g1654 329 FunFam Peroxidase 28 176 - -
Tan05g1654 329 ProSiteProfiles Plant heme peroxidase family profile. 24 328 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1654 329 CDD secretory_peroxidase 24 327 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan05g1654 329 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1654 329 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1654 329 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1654 329 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1654 329 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1654 329 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1654 329 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1654 329 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1654 329 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1654 329 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1654 329 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1654 329 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1654 329 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1654 329 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1654 329 Pfam Peroxidase 41 291 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1654 329 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601(InterPro)
Tan05g1654 329 Gene3D - 28 328 - -
Tan05g1654 329 Gene3D Peroxidase, domain 2 166 307 - -
Tan05g1654 329 SUPERFAMILY Heme-dependent peroxidases 24 328 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1654 329 PANTHER - 9 328 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1654 329 FunFam Peroxidase 166 307 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1646 Tan-Chr3:72558800 Tan05g1654 Tan-Chr5:45181190 5.10E-144 dispersed
Tan05g1654 Tan-Chr5:45181190 Tan11g0147 Tan-Chr11:1382984 5.00E-115 dispersed
Tan05g1654 Tan-Chr5:45181190 Tan05g2038 Tan-Chr5:70579068 1.20E-71 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g1654 K00430 - csv:101208254 591.267