Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g1655 ATGAGAGCTCATCGTTTGAGCTTCTTCATTTCGTTTCTATCATTCTTCGCTACATTCATTAGAGGGTTGCCGCTTGTCCACGTTTCCGGCATTTCCTCCAGGAGGATTCTGCATCAGCCGCTCTTTCCGGTTGGGTCCGAGCCACCGCCGGACATTGACTTGACACCACCCCCGCCCCCGCCGCCGGACTCTCCCTCCGACGATCAGCCGTTTTTCCATGAGCTGCCGACGAGTCCAGATCAAAGTCAACCGCCTCCTTCGTCCAGCAATGGAACTATGCCTATCCCGGCCGCTACGGCGCAACAGTCCAAGCCGACAAAGACCGTCGCGATTGCGATTTCGGTTGGGATTGTGACTTTGGGGATGCTCTCTGCTCTCGCGTTCTTTCTGTATCGTCACCGGGCCAAGCATCCGGGGGAGTCGCAGAAGCTTGTTGGAGGGAGTAATCCAGAGAGATTTGCGGAGGATTCGAGAGCGCCGCCGTCGAGTTTTTTCTATATTGGGACTGTGGAGCCGAGCCAGAGCTCTATTGTTGAACAGAATGGTGCTAATGGTGCTAATAGCTCGCCTTATCGGAAGCTGAATTCGATTAAGAGGTCGGATCGGTACCGACCGAGTCCGGAATTGCAGCCGCTCCCACCTCTGCCGAAGCCGCCGGTGGCTATGTCGCCTCCGGCTCTGTCCTCTTCCGATGATGAAAGCCAGAATACGGCATTCCATACTCCACAATGCTCGTCGATTGTCAGTCATGATGATGGCTATTTCTCACCGGCTTCTCGTCGGAGTAATTCAGTTAAGAGCTGTTCGACGGCAAGTATTAAGAATGACCATATGAATTCCAATCCTCCTCCCATTCCTCATTCTAAAAGAACCTCTCCTAAATCAAGATTTTCTGTTTCTTCGACGAAGCGCAATTCGTCTCAGCCTCAGCCTCAGCCACCGCCGCCGCCTCCTCCTCCATCGCGTCCGATTAATGACCTTCGTGAAACTCCTAATTCGAAAGAAACAATGCCTTTCTCTTCCACGAGACCTAAATTTTCGAAGCCTCCGCCCCCGCCGAATTTGGCGCTTCTTCAAACAATTAGCAATTCCGCCACGTTTCCTCAAGTTCCGAAACCTGCTACTGCACCTCCACCTCCACCTCCACCTCCACCTCCGCCTCCGCCTCTGCCGCCGCCACCGCCACCTCCACGGCCACCGGCGCATCCGGTTTCTTATTCAACGCCACAAAAACTTGGGTTATCGGAAACCAGAATGCCTGCAGTCACTCCTCCAGACTCCTCTAAGTCACAGTCCTACTCAACAGCGAGATCAAACTCATCTTCCAAATCCACACCGACTTCAGCACCCGCAAATTCTGCCAAAGAAGATACTGTCCAGAGGATTAATTCCATGGAGAGGCTTGAAGCAGATGATACAGAAGGTTCAAAACCGAGATTGAAGCCGTTGCACTGGGACAAAGTACGGGCAACCTCAGACCGAGCTACCGTCTGGGATCAACTTAAATCAAGCTCATTCCAATTAAACGAGGACATGATGGAGACACTTTTCGGCTTCAATTCTGCAAATTCTGTTCCCAAAGAGGCCACGAGAAAGTCTGTTCTTCCCCCGGTTGAGAAGGAAAATAGGGTATTGGACCCCAAAAAGTCGCAGAACATTGCAATACTCCTAAGAGCACTTAATGTCACGCGCGATGAGGTGATCGAAGCTCTTCAAGATGGTAACCCAGAAGGCTTTGGTACTGAGCTTTTAGAAACTCTTGTAAAGATGGCTCCAACGAAAGAGGAGGAGATAAAACTCAGAGAGTACTGTGGTGATGTTTCAAAATTAGGGACTGCAGAAAGATTTCTCAAGGCAGTGCTTGAAGTCCCATTTGCTTTTAGAAGAGTTGAGGCCATGCTGTACAGAGCCAATTTTGATTCAGAAGTAAAGTACCTAAGGAAGTCATTCCAAACCCTTGAGGGTGCAAGTGAAGAATTAAAGAACAGTAGACTTTTTCTTAAACTCCTTGAAGCAGTTCTTAAGACAGGAAATAGGATGAACGTTGGTACGAATCGTGGTGATGCTAAAGCCTTTAAGCTTGAAACTCTATTGAAATTAGTAGATATAAAGGGAACGGATGGAAAGACAACATTGCTTCATTTTGTTGTTCAAGAAATTATCAGATCAGAAGGTGGTGCTGATTCAACTAATGACAACCTTCAACCCCGTACGCAATCCAAAATCGAGGACGAATTTAGAAAGCAGGGTTTGCAGGTTGTGGCTGGACTAAGCAGAGACCTTAGCAATGTAAAAAAAGCAGCAGGTATGGACTCAGATGTCTTGAGCAGTTATGTCACAAAGCTCGAAATGGGACTGGAAAAAGTAAGGTTGGTTTTGCAATTCGAAAAGCCAGGAATGCAGGGAAAATTCATTGAATCAATGAAAACATTCTTGAAAGAGGCAGGAGACGAAATAATTAGGATCAAGGACGACGAAAGGAAAGCTTTATCCCTTGTGAAAGGGGCCACAGAGTATTTCCATGGCGACGCTGCTAAGGAGGAAGCTCATCCCTTCCGAATCTTCATGATCGTTCGAGATTTCCTAACCATACTAGATCAAGTATGCAAAGAAGTCGGGAGAATGCAGGACGGAGTAATGGTGGGTGCTGCTAGATCCTTTCGGATATCAGCAACAGCCTCACTCCCAGTCCTCAGCAGGTATAATGTCAGACACGACCAAAGCTCCGACGAGGATAGCTCATCTCCATGA 2751 48.49 MRAHRLSFFISFLSFFATFIRGLPLVHVSGISSRRILHQPLFPVGSEPPPDIDLTPPPPPPPDSPSDDQPFFHELPTSPDQSQPPPSSSNGTMPIPAATAQQSKPTKTVAIAISVGIVTLGMLSALAFFLYRHRAKHPGESQKLVGGSNPERFAEDSRAPPSSFFYIGTVEPSQSSIVEQNGANGANSSPYRKLNSIKRSDRYRPSPELQPLPPLPKPPVAMSPPALSSSDDESQNTAFHTPQCSSIVSHDDGYFSPASRRSNSVKSCSTASIKNDHMNSNPPPIPHSKRTSPKSRFSVSSTKRNSSQPQPQPPPPPPPPSRPINDLRETPNSKETMPFSSTRPKFSKPPPPPNLALLQTISNSATFPQVPKPATAPPPPPPPPPPPPPLPPPPPPPRPPAHPVSYSTPQKLGLSETRMPAVTPPDSSKSQSYSTARSNSSSKSTPTSAPANSAKEDTVQRINSMERLEADDTEGSKPRLKPLHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGFNSANSVPKEATRKSVLPPVEKENRVLDPKKSQNIAILLRALNVTRDEVIEALQDGNPEGFGTELLETLVKMAPTKEEEIKLREYCGDVSKLGTAERFLKAVLEVPFAFRRVEAMLYRANFDSEVKYLRKSFQTLEGASEELKNSRLFLKLLEAVLKTGNRMNVGTNRGDAKAFKLETLLKLVDIKGTDGKTTLLHFVVQEIIRSEGGADSTNDNLQPRTQSKIEDEFRKQGLQVVAGLSRDLSNVKKAAGMDSDVLSSYVTKLEMGLEKVRLVLQFEKPGMQGKFIESMKTFLKEAGDEIIRIKDDERKALSLVKGATEYFHGDAAKEEAHPFRIFMIVRDFLTILDQVCKEVGRMQDGVMVGAARSFRISATASLPVLSRYNVRHDQSSDEDSSSP 916
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 45853534 45858103 + Tan0018698.1 Tan05g1655 752963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g1655 916 SMART it6_source 470 880 IPR015425 -
Tan05g1655 916 MobiDBLite consensus disorder prediction 326 343 - -
Tan05g1655 916 MobiDBLite consensus disorder prediction 371 404 - -
Tan05g1655 916 Gene3D Formin, FH2 domain 463 876 IPR042201 -
Tan05g1655 916 MobiDBLite consensus disorder prediction 84 104 - -
Tan05g1655 916 PANTHER FORMIN-RELATED 350 911 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Tan05g1655 916 SUPERFAMILY Formin homology 2 domain (FH2 domain) 387 876 - -
Tan05g1655 916 MobiDBLite consensus disorder prediction 308 325 - -
Tan05g1655 916 MobiDBLite consensus disorder prediction 197 461 - -
Tan05g1655 916 Pfam Formin Homology 2 Domain 473 865 IPR015425 -
Tan05g1655 916 MobiDBLite consensus disorder prediction 227 307 - -
Tan05g1655 916 MobiDBLite consensus disorder prediction 207 223 - -
Tan05g1655 916 MobiDBLite consensus disorder prediction 421 459 - -
Tan05g1655 916 MobiDBLite consensus disorder prediction 45 67 - -
Tan05g1655 916 MobiDBLite consensus disorder prediction 45 104 - -
Tan05g1655 916 ProSiteProfiles Formin homology-2 (FH2) domain profile. 470 891 IPR015425 -
Tan05g1655 916 MobiDBLite consensus disorder prediction 139 160 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1658 Tan-Chr3:72679493 Tan05g1655 Tan-Chr5:45853534 9.00E-36 dispersed
Tan05g0848 Tan-Chr5:6636559 Tan05g1655 Tan-Chr5:45853534 2.00E-72 dispersed
Tan05g0849 Tan-Chr5:6637829 Tan05g1655 Tan-Chr5:45853534 6.70E-20 dispersed
Tan05g1655 Tan-Chr5:45853534 Tan07g2065 Tan-Chr7:72130335 5.40E-143 dispersed
Tan05g1655 Tan-Chr5:45853534 Tan01g4501 Tan-Chr1:110637190 9.30E-103 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g1655 K28090 - csv:101208011 1417.14