Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g1663 ATGCAACAACTCATGTGGATGCTGAACGAGCTTGGTTCTCCCTACGGGGATATTGATCAGAAGCTGGCTTTTTACTTCCTTCAAGCGATGTTCAGTCGTGTCACTGACTCCGGTGACAGGTGCTACAAGACGTTGGCGTCGGTATCGGAGAAACGGTGCTGTTTCGAGTCGATGAGAAGAATGGTGTTGAAGTTTCAGGAGGTGAGTCCATGGATGACGTTTGGTCATGTTGCTTCAAATGGTGCAATCATGGAAGCTTTTGAAGGAGAAAAGAAGTTGCATATAATTGATATTAGCAACTCATTTTGCACTCAATGGCCGACTTTCCTAGAAGCTCTTGCAACGCGGTCAGATGAAACTCCATACCTCCGCCTCACAACGGTTGTTGCAGCCAAATCAGACGGTACCATACGAGCTCATAAGAAGGTGATGAGAGAAATTAGCACAAGAATGGAGAAATTCGCCAGGCTTATGGGGGTTCCGTTCAAATTCAAATCAATATTTCACTCCGGCGATATTGCAGACATAAATTTCACAGAATTAGGCGTCAAAGACGACGAAGCCGTCGCCATCAACTGCGTCGGCGCGTTGCGCTCCGTCACTCCGGTGGAAAACCGCCGCGATTTTCTGATATCTCTGTTCGGAGCTTTGCGGCCGAGGGTAATCACGGTAGTGGAGGAGGAAGCGGATTTCCACGGCGTTGACTTTGTCAAAGACGTTCAAGAGTGTTTACGGTGGTTTAGGGTTTACTTCGATTCCTTGGACGGAAATTTCCCGACGGCCAGTGACGAGCAGTTGATACTTGAACGCGCCGCGGGACGCGCCGTCGTGGACCTGTTGTCAGCCCCCTTGGCGGGGTCTGTTGAGAGGCGCGAGACGGCGGCGCGTTGGGCTCGTCGTTTGCATGAGGGTGGTTTCAGTCCGGTGTCGTTTAGCGAGGATGTAAACGATGACGTACGAGCGCTTTTGAGGAGGTATAAGGACGGGTGGACGGTGTCGAAGGAAAGCGAGGGCGCCGGTGCCGGAATTTTCTTGGCTTGGAAAGGGCAGCCGGTTGTTTGGGCCGCCGCGTGGACCACAGGGCGGAGAGAAAAGTCGCCGGAGTAG 1107 52.12 MQQLMWMLNELGSPYGDIDQKLAFYFLQAMFSRVTDSGDRCYKTLASVSEKRCCFESMRRMVLKFQEVSPWMTFGHVASNGAIMEAFEGEKKLHIIDISNSFCTQWPTFLEALATRSDETPYLRLTTVVAAKSDGTIRAHKKVMREISTRMEKFARLMGVPFKFKSIFHSGDIADINFTELGVKDDEAVAINCVGALRSVTPVENRRDFLISLFGALRPRVITVVEEEADFHGVDFVKDVQECLRWFRVYFDSLDGNFPTASDEQLILERAAGRAVVDLLSAPLAGSVERRETAARWARRLHEGGFSPVSFSEDVNDDVRALLRRYKDGWTVSKESEGAGAGIFLAWKGQPVVWAAAWTTGRREKSPE 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 46199895 46202259 + Tan0005571.2 Tan05g1663 752971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g1663 368 ProSiteProfiles GRAS family profile. 1 359 IPR005202 -
Tan05g1663 368 Pfam GRAS domain family 2 359 IPR005202 -
Tan05g1663 368 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 358 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0008356(PANTHER)|GO:0009956(PANTHER)|GO:0043565(PANTHER)|GO:0045930(PANTHER)|GO:0048366(PANTHER)|GO:0055072(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1662 Tan-Chr3:72716270 Tan05g1663 Tan-Chr5:46199895 6.50E-143 dispersed
Tan05g1663 Tan-Chr5:46199895 Tan06g1555 Tan-Chr6:24044318 6.60E-108 dispersed
Tan05g1662 Tan-Chr5:46198852 Tan05g1663 Tan-Chr5:46199895 1.30E-215 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27520 PF03514 GRAS 3.70E-93 CL0063 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g1663 K27743 - csv:101210294 567.77