Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g1685 | ATGGACGACATTGACATACTGAAATCGACACTATCCCCATCCGAGTCCATCGACATGTCGTCCACAATCTTCCAGTTCCAGCTCAACAACAATCCCCACTACTCTCCACTACCCTTCTTCTCCGATTTCTCATCTCCCTCCTTCTTCCCAGACCCGCCACCACCACCGCACCACCACCGCCAGAAGCGCTCCGGAAGCGGAGGCGGAATGGCGGCGATGAGAGAAATGATATTCCGAATAGCGGCGATGCAGCCGATACAGATAGACCCGGAGGCGATAAAGGCACCGAAGCGGCGGAACGTGAGGATCTCGAAGGACCCACAGAGCGTGGCGGCGCGTCACCGTCGGGAGAGAATCAGCCAGAAGATTAGGATTCTGCAGCGGCTGGTCCCCGGCGGCACGAAGATGGACACGGCGTCGATGCTTGATGAGGCGGTTCATTATGTGAAGTTCTTGAAAAGGCAAGTTCAGACGCTGGAGCAGGCTGGCTTTCACAATACTAATACTGATATTAATATTAATTATAATAATTCCAGTTTTCCGAATTGTGCCAATCTTAGTTATTCTTCGGCCCTTTTCAAAGCTTGCCAGATGCCCCACAATCAAACTATGCCTGGTTCTCTGCAAATGCATTGA | 636 | 51.73 | MDDIDILKSTLSPSESIDMSSTIFQFQLNNNPHYSPLPFFSDFSSPSFFPDPPPPPHHHRQKRSGSGGGMAAMREMIFRIAAMQPIQIDPEAIKAPKRRNVRISKDPQSVAARHRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGFHNTNTDININYNNSSFPNCANLSYSSALFKACQMPHNQTMPGSLQMH | 211 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 49618688 | 49619682 | - | Tan0014971.1 | Tan05g1685 | 752993 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g1685 | 211 | Gene3D | - | 102 | 171 | IPR036638 | GO:0046983(InterPro) | |
Tan05g1685 | 211 | MobiDBLite | consensus disorder prediction | 46 | 68 | - | - | |
Tan05g1685 | 211 | Pfam | Helix-loop-helix DNA-binding domain | 112 | 153 | IPR011598 | GO:0046983(InterPro) | |
Tan05g1685 | 211 | CDD | bHLH_AtIND_like | 104 | 160 | - | - | |
Tan05g1685 | 211 | SMART | finulus | 109 | 158 | IPR011598 | GO:0046983(InterPro) | |
Tan05g1685 | 211 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 103 | 152 | IPR011598 | GO:0046983(InterPro) | |
Tan05g1685 | 211 | PANTHER | TRANSCRIPTION FACTOR HEC3-RELATED | 29 | 198 | IPR045843 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan05g1685 | 211 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 107 | 161 | IPR036638 | GO:0046983(InterPro) | |
Tan05g1685 | 211 | Coils | Coil | 142 | 162 | - | - | |
Tan05g1685 | 211 | FunFam | BHLH transcription factor | 106 | 170 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g4766 | Tan-Chr1:113495252 | Tan05g1685 | Tan-Chr5:49618688 | 6.50E-38 | dispersed | |
Tan02g1808 | Tan-Chr2:83613506 | Tan05g1685 | Tan-Chr5:49618688 | 4.10E-39 | dispersed | |
Tan03g0769 | Tan-Chr3:63654686 | Tan05g1685 | Tan-Chr5:49618688 | 4.30E-18 | dispersed | |
Tan03g1315 | Tan-Chr3:69651855 | Tan05g1685 | Tan-Chr5:49618688 | 3.20E-34 | dispersed | |
Tan04g2726 | Tan-Chr4:86745543 | Tan05g1685 | Tan-Chr5:49618688 | 8.90E-25 | dispersed | |
Tan05g1685 | Tan-Chr5:49618688 | Tan06g0202 | Tan-Chr6:1768502 | 1.60E-29 | dispersed | |
Tan02g0299 | Tan-Chr2:2543325 | Tan05g1685 | Tan-Chr5:49618688 | 2.70E-09 | transposed | |
Tan05g1754 | Tan-Chr5:54874455 | Tan05g1685 | Tan-Chr5:49618688 | 3.10E-70 | transposed | |
Tan05g1685 | Tan-Chr5:49618688 | Tan06g1902 | Tan-Chr6:54341331 | 4.90E-07 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27521 | PF00010 | HLH | 7.90E-07 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g1685 | - | - | - | 0.0 |