Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g1729 ATGTCAATCAAATTTCCTAATTTATTGGCCAGCATCACCTTAGGCCTCATAATGCTCTTGAGTTTCCCATCGTCCAGCTTCGGCGCCCTTCAAGTGGGATTCTACAACGGAAAATGTGGCTTTAGAAATGTCGAATCCATTGTCAGAGGTGTTGTCACCGCCGCCCTCGACGATGATCAAACTCTTGTCGCTGCTCTTCTTCGCTTACAGTTCCACGACTGCTTTGTCTCTGGATGCGATGCTTCTCTTCTCTTGGATGGGAGCAAAAGCGAGAAGTTAGCTCCTCCGAACCTAAGCGTAAGAGGCTATGGTCTGATTGATGCAGTGAAGATTGCTGTGGAGAGGGCATGTCCTGGAGTTGTCTCTTGTGCTGATATCATTGCCATGGCTACTAGAGATGCTGTTTATTTGTCTGGAGGAGAATCGTACGCGGTCGAAACTGGACGGAGAGACGGGTTCAAACCGGCCGATAATGTGGATCTTCCAGGGCCTTCAATATCAGTCCCAGACTCCATTGCAGCCTTCTCCACAAGGAACCTAACTGTTACGGATATGGTTTATCTTCTTGGCGGCCATACTGTCGGTGTAGCACAATGCCTCTTCTTCAAGGATCGCCTCTATAATTACAAGAACACAAGGAGACCCGACCCGACCATCGATCCATGGTTTCTCAACGACCTGCGAAACCAATGTCCTCGAGATTCTAACGACGACAACGTTGTATTTCTTGACCAAAACCTTATGAGTTCTTTCGTCGTCGACAAGTCATTTCACAGGCAAATACTGCAACGTAGAGGGATACTGGAAATCGATCAGCAACTTGCTTTGAATCCCTTAACGAAGGATTTGGTGTCGAAGGTGGCGTTCGGGTTCGATTTTGCCTCCAAGTTTGGACAAGCCATGATCAACATGGGAAGAATTAAAGTTCTCACTGGCTCTGATGGGGAGATTAGAAGAACATGTGGTGCTGTTAATTGA 978 47.24 MSIKFPNLLASITLGLIMLLSFPSSSFGALQVGFYNGKCGFRNVESIVRGVVTAALDDDQTLVAALLRLQFHDCFVSGCDASLLLDGSKSEKLAPPNLSVRGYGLIDAVKIAVERACPGVVSCADIIAMATRDAVYLSGGESYAVETGRRDGFKPADNVDLPGPSISVPDSIAAFSTRNLTVTDMVYLLGGHTVGVAQCLFFKDRLYNYKNTRRPDPTIDPWFLNDLRNQCPRDSNDDNVVFLDQNLMSSFVVDKSFHRQILQRRGILEIDQQLALNPLTKDLVSKVAFGFDFASKFGQAMINMGRIKVLTGSDGEIRRTCGAVN 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 53217442 53219736 - Tan0021586.1 Tan05g1729 753037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g1729 325 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1729 325 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1729 325 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1729 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1729 325 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1729 325 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1729 325 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1729 325 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1729 325 FunFam Peroxidase 33 163 - -
Tan05g1729 325 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601(InterPro)
Tan05g1729 325 Gene3D - 33 325 - -
Tan05g1729 325 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1729 325 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1729 325 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1729 325 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1729 325 ProSiteProfiles Plant heme peroxidase family profile. 29 325 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1729 325 PANTHER PEROXIDASE 25-RELATED 23 321 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Tan05g1729 325 FunFam Peroxidase 162 304 - -
Tan05g1729 325 Pfam Peroxidase 48 288 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1729 325 Gene3D Peroxidase, domain 2 162 304 - -
Tan05g1729 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Tan05g1729 325 SUPERFAMILY Heme-dependent peroxidases 30 325 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g1729 325 CDD secretory_peroxidase 30 324 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g1729 Tan-Chr5:53217442 Tan09g1405 Tan-Chr9:66177062 1.80E-64 dispersed
Tan05g1729 Tan-Chr5:53217442 Tan03g2030 Tan-Chr3:75315168 2.30E-59 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g1729 K00430 - csv:101210173 467.233