Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g1749 ATGGCGAATCAGCGAGTTGACGACACCGGCTTATCCAACTCTTTACCTTATTCAAATTTCCATGGAATCCACCATAACCCTTCTGCACCTTTCATGAATCAGGAAGGGTCAGCTTTTGATTTTGGAGAGCTTGAAGAAGCTATAGTTTTTCAGGGGGTGAAGCTTGGAAATGATGAATCCAAATCGCCACATTTTCTTACAGGGAGGCCTGCTGCTACTCTTGAAATGTTCCCTTCTTGGCCAATAAGGTTTCAACAATCCCCAACATTGGGAGGAGGTTCAAAGTCAGAGAGCACAGATTCAGGATCAGCAAATATAAACAACACTCTCACAAGCAAAACAGAATTGGAAATGGAACCTGAATCAGAATCACCCATTAGCAGAAGGGCTTGTTCTTCAACTCAAGGATTTGACCAAATTCATCATCTTCAAATTCAACATCTTCATACAGATATGGAAGATGATAATGTTTTGAGAACAGAACCATCATCACACCGAAATCAATCCCAATCCCCTCCCAAAGAAAAGAGAAAAGGAGCTGGTTCAACATCAGAGAGGCAGCTTGATGCCAAGACACTGAGACGATTGGCTCAAAACAGAGAAGCTGCAAGAAAGAGCCGTCTGAGGAAGAAGGCATATATTCAGCAGTTAGAGAGCAGTAGAATCAAGCTCTCTCAGCTTGAACAAGATCTCCATAGAGCACGTTCTCAGGGATTGTTTCTAGGAGCTTGTGGTGGCGTTATCGGTGGCAATATCAGCTCTGGAGCTGCAATATTTGACATGGAGTATGCACGGTGGCTAGACGAGGACCACCGTCTAATGGCGGAGCTGAGGGCGGCGCTGCACGGGCATCTCCCGGACGGCGATCTCCGAGCAATAGTAGATAGTTACATCTGTCACTACGACGAAATATTTCACCTGAAAGGCGTGGCGGCAAAATCTGACGTGTTTCATCTGATTACCGGAATGTGGATGACTCCGGCGGAGCGTTGCTTCCTGTGGATCGGCGGATTCCGGCCATCCAAGCTGATAGAGATGCTAATTCCGCAATTAGACACATTAACAGAGCAACAAGTAGTAGGAATATGTAATTTGCAAAGATCTTCACAAGAAACAGAGGATGCTCTGTATCAGGGGCTTGAGCAGCTGCAGCATTCCCTCATAATCACCATCGCCGGCACCGCCCTCGTCGACGGCATCAACCATATGGCCGTCGCCGCCGGCAAGCTCTCCAATCTTGAAGGCTTCATCCGCCAGGCTGATATGTTGAGACAACAAACGCTTCATCAATTACGTCGAATATTGACAGTCCGACAAGCTGCACGATGTTTTGTAGTGATTGGAGAGTACTATGGAAGGCTTCGAGCCCTTAGTTCTTTGTGGGTCTCCCGACCAAGAGAGAGCTGCTTGAACGATGAAAATTCATGTCAAACAACAACGGAGCTACAGATGATTCAGAGTTCCCACTCCCATTTCCCAAACTTTTGA 1488 46.57 MANQRVDDTGLSNSLPYSNFHGIHHNPSAPFMNQEGSAFDFGELEEAIVFQGVKLGNDESKSPHFLTGRPAATLEMFPSWPIRFQQSPTLGGGSKSESTDSGSANINNTLTSKTELEMEPESESPISRRACSSTQGFDQIHHLQIQHLHTDMEDDNVLRTEPSSHRNQSQSPPKEKRKGAGSTSERQLDAKTLRRLAQNREAARKSRLRKKAYIQQLESSRIKLSQLEQDLHRARSQGLFLGACGGVIGGNISSGAAIFDMEYARWLDEDHRLMAELRAALHGHLPDGDLRAIVDSYICHYDEIFHLKGVAAKSDVFHLITGMWMTPAERCFLWIGGFRPSKLIEMLIPQLDTLTEQQVVGICNLQRSSQETEDALYQGLEQLQHSLIITIAGTALVDGINHMAVAAGKLSNLEGFIRQADMLRQQTLHQLRRILTVRQAARCFVVIGEYYGRLRALSSLWVSRPRESCLNDENSCQTTTELQMIQSSHSHFPNF 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 54624792 54630069 + Tan0018104.1 Tan05g1749 753057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g1749 495 SUPERFAMILY Leucine zipper domain 191 233 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan05g1749 495 Pfam Seed dormancy control 274 348 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Tan05g1749 495 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 189 233 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan05g1749 495 FunFam BZIP family transcription factor 190 239 - -
Tan05g1749 495 Coils Coil 210 237 - -
Tan05g1749 495 Gene3D - 190 239 - -
Tan05g1749 495 ProSiteProfiles DOG1 domain profile. 256 464 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Tan05g1749 495 SMART brlzneu 187 253 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan05g1749 495 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 194 209 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan05g1749 495 Pfam bZIP transcription factor 190 231 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan05g1749 495 CDD bZIP_HBP1b-like 191 242 - -
Tan05g1749 495 MobiDBLite consensus disorder prediction 83 115 - -
Tan05g1749 495 MobiDBLite consensus disorder prediction 170 191 - -
Tan05g1749 495 PANTHER TRANSCRIPTION FACTOR TGA9 146 468 - -
Tan05g1749 495 MobiDBLite consensus disorder prediction 158 191 - -
Tan05g1749 495 MobiDBLite consensus disorder prediction 83 133 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0125 Tan-Chr5:981518 Tan05g1749 Tan-Chr5:54624792 4.40E-144 dispersed
Tan05g1749 Tan-Chr5:54624792 Tan05g1751 Tan-Chr5:54624792 5.90E-253 dispersed
Tan05g1749 Tan-Chr5:54624792 Tan05g1750 Tan-Chr5:54624792 2.90E-231 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27526 PF14144 DOG1 3.90E-30 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g1749 K14431 - csv:101204604 847.04