Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g1750 ATGGAATCCACCATAACCCTTCTGCACCTTTCATATTTTCTTACAGGGAGGCCTGCTGCTACTCTTGAAATGTTCCCTTCTTGGCCAATAAGGTTTCAACAATCCCCAACATTGGGAGGAGGTTCAAAGTCAGAGAGCACAGATTCAGGATCAGCAAATATAAACAACACTCTCACAAGCAAAACAGAATTGGAAATGGAACCTGAATCAGAATCACCCATTAGCAGAAGGGCTTGTTCTTCAACTCAAGGATTTGACCAAATTCATCATCTTCAAATTCAACATCTTCATACAGATATGGAAGATGATAATGTTTTGAGAACAGAACCATCATCACACCGAAATCAATCCCAATCCCCTCCCAAAGAAAAGAGAAAAGGAGCTGGTTCAACATCAGAGAGGCAGCTTGATGCCAAGACACTGAGACGATTGGCTCAAAACAGAGAAGCTGCAAGAAAGAGCCGTCTGAGGAAGAAGGCATATATTCAGCAGTTAGAGAGCAGTAGAATCAAGCTCTCTCAGCTTGAACAAGATCTCCATAGAGCACGTTCTCAGGGATTGTTTCTAGGAGCTTGTGGTGGCGTTATCGGTGGCAATATCAGCTCTGGAGCTGCAATATTTGACATGGAGTATGCACGGTGGCTAGACGAGGACCACCGTCTAATGGCGGAGCTGAGGGCGGCGCTGCACGGGCATCTCCCGGACGGCGATCTCCGAGCAATAGTAGATAGTTACATCTGTCACTACGACGAAATATTTCACCTGAAAGGCGTGGCGGCAAAATCTGACGTGTTTCATCTGATTACCGGAATGTGGATGACTCCGGCGGAGCGTTGCTTCCTGTGGATCGGCGGATTCCGGCCATCCAAGCTGATAGAGATGCTAATTCCGCAATTAGACACATTAACAGAGCAACAAGTAGTAGGAATATGTAATTTGCAAAGATCTTCACAAGAAACAGAGGATGCTCTGTATCAGGGGCTTGAGCAGCTGCAGCATTCCCTCATAATCACCATCGCCGGCACCGCCCTCGTCGACGGCATCAACCATATGGCCGTCGCCGCCGGCAAGCTCTCCAATCTTGAAGGCTTCATCCGCCAGGCTGATATGTTGAGACAACAAACGCTTCATCAATTACGTCGAATATTGACAGTCCGACAAGCTGCACGATGTTTTGTAGTGATTGGAGAGTACTATGGAAGGCTTCGAGCCCTTAGTTCTTTGTGGGTCTCCCGACCAAGAGAGAGCTGCTTGAACGATGAAAATTCATGTCAAACAACAACGGAGCTACAGATGATTCAGAGTTCCCACTCCCATTTCCCAAACTTTTGA 1332 46.92 MESTITLLHLSYFLTGRPAATLEMFPSWPIRFQQSPTLGGGSKSESTDSGSANINNTLTSKTELEMEPESESPISRRACSSTQGFDQIHHLQIQHLHTDMEDDNVLRTEPSSHRNQSQSPPKEKRKGAGSTSERQLDAKTLRRLAQNREAARKSRLRKKAYIQQLESSRIKLSQLEQDLHRARSQGLFLGACGGVIGGNISSGAAIFDMEYARWLDEDHRLMAELRAALHGHLPDGDLRAIVDSYICHYDEIFHLKGVAAKSDVFHLITGMWMTPAERCFLWIGGFRPSKLIEMLIPQLDTLTEQQVVGICNLQRSSQETEDALYQGLEQLQHSLIITIAGTALVDGINHMAVAAGKLSNLEGFIRQADMLRQQTLHQLRRILTVRQAARCFVVIGEYYGRLRALSSLWVSRPRESCLNDENSCQTTTELQMIQSSHSHFPNF 443
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 54624792 54630069 + Tan0018104.2 Tan05g1750 753058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g1750 443 Coils Coil 158 185 - -
Tan05g1750 443 PANTHER TRANSCRIPTION FACTOR TGA9 94 416 - -
Tan05g1750 443 MobiDBLite consensus disorder prediction 36 63 - -
Tan05g1750 443 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 137 181 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan05g1750 443 ProSiteProfiles DOG1 domain profile. 204 412 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Tan05g1750 443 Gene3D - 138 187 - -
Tan05g1750 443 Pfam bZIP transcription factor 138 179 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan05g1750 443 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 142 157 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan05g1750 443 CDD bZIP_HBP1b-like 139 190 - -
Tan05g1750 443 SMART brlzneu 135 201 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan05g1750 443 MobiDBLite consensus disorder prediction 36 81 - -
Tan05g1750 443 Pfam Seed dormancy control 222 296 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Tan05g1750 443 MobiDBLite consensus disorder prediction 118 139 - -
Tan05g1750 443 SUPERFAMILY Leucine zipper domain 139 181 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan05g1750 443 MobiDBLite consensus disorder prediction 106 139 - -
Tan05g1750 443 FunFam BZIP family transcription factor 138 187 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0126 Tan-Chr5:981518 Tan05g1750 Tan-Chr5:54624792 7.40E-132 dispersed
Tan05g1750 Tan-Chr5:54624792 Tan08g1467 Tan-Chr8:60396535 4.10E-96 dispersed
Tan05g1749 Tan-Chr5:54624792 Tan05g1750 Tan-Chr5:54624792 2.90E-231 tandem
Tan05g1750 Tan-Chr5:54624792 Tan05g1751 Tan-Chr5:54624792 1.10E-213 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27527 PF14144 DOG1 3.30E-30 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g1750 K14431 - csv:101204604 766.148