Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g1751 | ATGGCGAATCAGCGAGTTGACGACACCGGCTTATCCAACTCTTTACCTTATTCAAATTTCCATGGAATCCACCATAACCCTTCTGCACCTTTCATGAATCAGGAAGGGTCAGCTTTTGATTTTGGAGAGCTTGAAGAAGCTATAGTTTTTCAGGGGGTGAAGCTTGGAAATGATGAATCCAAATCGCCACATTTTCTTACAGGGAGGCCTGCTGCTACTCTTGAAATGTTCCCTTCTTGGCCAATAAGGTTTCAACAATCCCCAACATTGGGAGGAGGTTCAAAGTCAGAGAGCACAGATTCAGGATCAGCAAATATAAACAACACTCTCACAAGCAAAACAGAATTGGAAATGGAACCTGAATCAGAATCACCCATTAGCAGAAGGGCTTGTTCTTCAACTCAAGGATTTGACCAAATTCATCATCTTCAAATTCAACATCTTCATACAGATATGGAAGATGATAATGTTTTGAGAACAGAACCATCATCACACCGAAATCAATCCCAATCCCCTCCCAAAGAAAAGAGAAAAGGAGCTGGTTCAACATCAGAGAGGCAGCTTGATGCCAAGACACTGAGACGATTGGCTCAAAACAGAGAAGCTGCAAGAAAGAGCCGTCTGAGGAAGAAGGCATATATTCAGCAGTTAGAGAGCAGTAGAATCAAGCTCTCTCAGCTTGAACAAGATCTCCATAGAGCACGTTCTCAGGGATTGTTTCTAGGAGCTTGTGGTGGCGTTATCGGTGGCAATATCAGCTCTGGAGCTGCAATATTTGACATGGAGTATGCACGGTGGCTAGACGAGGACCACCGTCTAATGGCGGAGCTGAGGGCGGCGCTGCACGGGCATCTCCCGGACGGCGATCTCCGAGCAATAGTAGATAGTTACATCTGTCACTACGACGAAATATTTCACCTGAAAGGCGTGGCGGCAAAATCTGACGTGTTTCATCTGATTACCGGAATGTGGATGACTCCGGCGGAGCGTTGCTTCCTGTGGATCGGCGGATTCCGGCCATCCAAGCTGATAGAGATGCTAATTCCGCAATTAGACACATTAACAGAGCAACAAGTAGTAGGAATATGTAATTTGCAAAGATCTTCACAAGAAACAGAGGATGCTCTGTATCAGGGGCTTGAGCAGCTGCAGCATTCCCTCATAATCACCATCGCCGGCACCGCCCTCGTCGACGGCATCAACCATATGGCCGTCGCCGCCGGCAAGCTCTCCAATCTTGAAGGCTTCATCCGCCAGGCTGATATGTTGAGACAACAAACGCTTCATCAATTACGTCGAATATTGACAGTCCGACAAGCTGCACGATGTTTTGTAGTGATTGGAGAGTACTATGGAAGGCTTCGAGCCCTTAGTTCTTTGTGGGTCTCCCGACCAAGAGAGTAA | 1404 | 46.79 | MANQRVDDTGLSNSLPYSNFHGIHHNPSAPFMNQEGSAFDFGELEEAIVFQGVKLGNDESKSPHFLTGRPAATLEMFPSWPIRFQQSPTLGGGSKSESTDSGSANINNTLTSKTELEMEPESESPISRRACSSTQGFDQIHHLQIQHLHTDMEDDNVLRTEPSSHRNQSQSPPKEKRKGAGSTSERQLDAKTLRRLAQNREAARKSRLRKKAYIQQLESSRIKLSQLEQDLHRARSQGLFLGACGGVIGGNISSGAAIFDMEYARWLDEDHRLMAELRAALHGHLPDGDLRAIVDSYICHYDEIFHLKGVAAKSDVFHLITGMWMTPAERCFLWIGGFRPSKLIEMLIPQLDTLTEQQVVGICNLQRSSQETEDALYQGLEQLQHSLIITIAGTALVDGINHMAVAAGKLSNLEGFIRQADMLRQQTLHQLRRILTVRQAARCFVVIGEYYGRLRALSSLWVSRPRE | 467 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 54624792 | 54629006 | + | Tan0018104.3 | Tan05g1751 | 753059 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g1751 | 467 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 189 | 233 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan05g1751 | 467 | Coils | Coil | 210 | 237 | - | - | |
Tan05g1751 | 467 | ProSiteProfiles | DOG1 domain profile. | 256 | 464 | IPR025422 | GO:0006351(InterPro)|GO:0043565(InterPro) | |
Tan05g1751 | 467 | Pfam | bZIP transcription factor | 190 | 231 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan05g1751 | 467 | SMART | brlzneu | 187 | 253 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan05g1751 | 467 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 194 | 209 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan05g1751 | 467 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 146 | 467 | - | - | |
Tan05g1751 | 467 | CDD | bZIP_HBP1b-like | 191 | 242 | - | - | |
Tan05g1751 | 467 | MobiDBLite | consensus disorder prediction | 83 | 115 | - | - | |
Tan05g1751 | 467 | FunFam | BZIP family transcription factor | 190 | 239 | - | - | |
Tan05g1751 | 467 | SUPERFAMILY | Leucine zipper domain | 191 | 233 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan05g1751 | 467 | Gene3D | - | 190 | 239 | - | - | |
Tan05g1751 | 467 | MobiDBLite | consensus disorder prediction | 170 | 191 | - | - | |
Tan05g1751 | 467 | MobiDBLite | consensus disorder prediction | 158 | 191 | - | - | |
Tan05g1751 | 467 | MobiDBLite | consensus disorder prediction | 83 | 133 | - | - | |
Tan05g1751 | 467 | Pfam | Seed dormancy control | 274 | 348 | IPR025422 | GO:0006351(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan05g1749 | Tan-Chr5:54624792 | Tan05g1751 | Tan-Chr5:54624792 | 5.90E-253 | dispersed | |
Tan05g1751 | Tan-Chr5:54624792 | Tan08g1467 | Tan-Chr8:60396535 | 3.90E-97 | dispersed | |
Tan05g1750 | Tan-Chr5:54624792 | Tan05g1751 | Tan-Chr5:54624792 | 1.10E-213 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27528 | PF14144 | DOG1 | 3.50E-30 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g1751 | K14431 | - | csv:101204604 | 796.578 |