Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g2004 | ATGGAAGAAACATTTTTTCCATTTCGTGGGATTAAGAATGATATAAGAGGAAGACTTCTATGCTACAAACAGGATTGGACTGGCGGACTTCGCTCTGGTATCAGGATCTTGGCCCCAACAACGTACATATTCTTTGCTTCAGCAATTCCAGTTATATCGTTTGGGGAGCAGCTAGAAAGGAATACATACGGGACTCTAACTGCCGTACAAACTCTAGCATCAACGGCACTTTGCGGCATCATCCACTCGATCTTTGGGGGACAGCCTCTGCTCATCCTTGGGGTCGCTGAACCAACTGTTTTGATGTATACATTTATGTTCGACTTTGCAAAGGACCGAAAGGAACTGGGGCAGGAACTATTCTTAGCCTGGACGGGATGGGTATGTGTATGGACAGCCATTTTGCTTTTCTTGCTGGCTGTGTTGGGTGCATGCTCCCTGATCAATAGGTTTACACGTCTTGCTGGAGAACTGTTTGGTCTGCTAATTGCTATGCTGTTTATGCAGCAGGCAATACGTGGTGTTGTGGAGGAATTCGGCATACCTCAGAGGGAAAATCCTAATCAGTTGGCACTTCAACCTCCTTGGCGCTTTGGCAATGGAATGTTTGCATTAGTGTTGTCCTTTGGGCTTCTACTAACTGCCCTTAAAAGTCGCAAGGCTAGATCATGGCGCTATGGGACTGGTTGCCTACGGGGCTTTATCGCGGATTATGGAGTTCCGCTTATGGTGCTTGTATGGACAGCCTTATCTTACATTCCAGTTAACAATGTCCCACTTGGGATCCCAAGAAGGCTTTTCAGTCCCAATCCATGGTCTCAGGGTGCCTACTCAAATTGGACGGTTGTAAAGGAAATGTTGAGAGTGCCTCCATTGTATATAGTTGGAGCATTCATACCAGCAACCATGATAGCAGTTCTTTACTACTTTGATCACAGTGTTGCATCTCAACTTGCCCAACAGAAAGAGTTTAATTTGAAAAAACCAGCTTCATATCATTATGATCTTCTTCTCCTAGGTTTCCTTGTTATACTATGTGGACTTATAGGCATACCACCTTCCAATGGTGTAATTCCTCAGTCTCCGATGCACACGAAAAGCCTAGCTACTCTAAAACATCAGCTTTTGCGGAACAAGCTGGTAGCAGCAGCGCGTCAAAGTTTTCGTAAAAATTCAAACTTGAGTCAATTATACCGGAACATGCAAGAGGCATATACTGAGATGCAGACTCCTTTAATTTACCAAAACCCACCAGCTGCGGGGCTGAAGGAGTTGAAAGATACCACAATCCAACTAGCTTCAAGAACTGGCTACATTGATGCTCCTGTTGATGAAACTATTTTCGATGTGGATAAAGATATTGATGATCTTCTGCCAGTGGAAGTTAAAGAACAGCGTCTCAGCAATTTGCTTCAGGCAATAATGGTTGGTGGTTGTGTTGCTGCTATGCCTCTTTTAAAGAAGATCCCGACTTCAGTTCTTTGGGGCTACTTTGCTTTCATGGCAATTGAGAGCTTGCCCGGAAATCAATTCTGGGAAAGGATTTTACTGCTTTTCACTGCTCCGAACCGAAGATACAAGGTGCTTGAGGAATATCATGCAACCTTCCTAGAAACTGTCCCCTTCAAAACAATTGCAACCTTTACCTTGTTTCAGACAGTATATCTGCTGATGTGTTTTGGTTTAACCTGGATTCCAATTGCTGGTGTTCTTTTTCCGCTGTTGATCATGCTTCTCGTCCCTGTGCGGCAGTATTTGCTCCCCAGGTTCTTCAAAGGTGCTCATCTTCAGGACTTGGATGCAGCTGAATACGAGGAAGCCCCTGCAATCGCTTTTAATCCGTCGTTCGAAGATCGAGTGGGAAGAACTCCCAACATTGATGACGGTGAAATATTCGACGAGATGATCACAAGGAGCCGTGGCGAGATTCGGCGTACGCAGAGTTCGAAAGTGACAAGCTCAACCCCAACTTCTCTAGAGGGCATCAAACCTGCATACAGCCCACAGATACCACAGAAACTGTACAGTCCAAGGATCAATGAGCTGAGAAGAGAAAGAAGTTCTCTATCTCCTGGAAAAGGACTTGACTTTAAGCTAAGTCCTCCTAGTGCAGAAGCAGGACCAGGACCATCTTTTAGAAATTAG | 2145 | 44.85 | MEETFFPFRGIKNDIRGRLLCYKQDWTGGLRSGIRILAPTTYIFFASAIPVISFGEQLERNTYGTLTAVQTLASTALCGIIHSIFGGQPLLILGVAEPTVLMYTFMFDFAKDRKELGQELFLAWTGWVCVWTAILLFLLAVLGACSLINRFTRLAGELFGLLIAMLFMQQAIRGVVEEFGIPQRENPNQLALQPPWRFGNGMFALVLSFGLLLTALKSRKARSWRYGTGCLRGFIADYGVPLMVLVWTALSYIPVNNVPLGIPRRLFSPNPWSQGAYSNWTVVKEMLRVPPLYIVGAFIPATMIAVLYYFDHSVASQLAQQKEFNLKKPASYHYDLLLLGFLVILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVAAARQSFRKNSNLSQLYRNMQEAYTEMQTPLIYQNPPAAGLKELKDTTIQLASRTGYIDAPVDETIFDVDKDIDDLLPVEVKEQRLSNLLQAIMVGGCVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPNRRYKVLEEYHATFLETVPFKTIATFTLFQTVYLLMCFGLTWIPIAGVLFPLLIMLLVPVRQYLLPRFFKGAHLQDLDAAEYEEAPAIAFNPSFEDRVGRTPNIDDGEIFDEMITRSRGEIRRTQSSKVTSSTPTSLEGIKPAYSPQIPQKLYSPRINELRRERSSLSPGKGLDFKLSPPSAEAGPGPSFRN | 714 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 69974347 | 69981178 | - | Tan0017552.1 | Tan05g2004 | 753312 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g2004 | 714 | Gene3D | Helical hairpin bin | 18 | 60 | - | - | |
Tan05g2004 | 714 | PANTHER | ANION EXCHANGE PROTEIN | 6 | 638 | IPR003020 | GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER) | |
Tan05g2004 | 714 | MobiDBLite | consensus disorder prediction | 646 | 662 | - | - | |
Tan05g2004 | 714 | MobiDBLite | consensus disorder prediction | 643 | 714 | - | - | |
Tan05g2004 | 714 | FunFam | probable boron transporter 2 | 18 | 60 | - | - | |
Tan05g2004 | 714 | Pfam | HCO3- transporter integral membrane domain | 7 | 179 | IPR011531 | GO:0006820(InterPro)|GO:0016020(InterPro) | |
Tan05g2004 | 714 | Pfam | HCO3- transporter integral membrane domain | 460 | 602 | IPR011531 | GO:0006820(InterPro)|GO:0016020(InterPro) | |
Tan05g2004 | 714 | Pfam | HCO3- transporter integral membrane domain | 202 | 372 | IPR011531 | GO:0006820(InterPro)|GO:0016020(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g2336 | Tan-Chr4:81729512 | Tan05g2004 | Tan-Chr5:69974347 | 0.00E+00 | dispersed | |
Tan04g2613 | Tan-Chr4:85326527 | Tan05g2004 | Tan-Chr5:69974347 | 2.30E-220 | dispersed | |
Tan04g2614 | Tan-Chr4:85326527 | Tan05g2004 | Tan-Chr5:69974347 | 3.40E-190 | dispersed | |
Tan05g2004 | Tan-Chr5:69974347 | Tan05g2005 | Tan-Chr5:69974347 | 1.80E-295 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g2004 | K24194 | - | csv:101203606 | 1367.06 |