Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2005 ATGTTTGCATTAGTGTTGTCCTTTGGGCTTCTACTAACTGCCCTTAAAAGTCGCAAGGCTAGATCATGGCGCTATGGGACTGGTTGCCTACGGGGCTTTATCGCGGATTATGGAGTTCCGCTTATGGTGCTTGTATGGACAGCCTTATCTTACATTCCAGTTAACAATGTCCCACTTGGGATCCCAAGAAGGCTTTTCAGTCCCAATCCATGGTCTCAGGGTGCCTACTCAAATTGGACGGTTGTAAAGGAAATGTTGAGAGTGCCTCCATTGTATATAGTTGGAGCATTCATACCAGCAACCATGATAGCAGTTCTTTACTACTTTGATCACAGTGTTGCATCTCAACTTGCCCAACAGAAAGAGTTTAATTTGAAAAAACCAGCTTCATATCATTATGATCTTCTTCTCCTAGGTTTCCTTGTTATACTATGTGGACTTATAGGCATACCACCTTCCAATGGTGTAATTCCTCAGTCTCCGATGCACACGAAAAGCCTAGCTACTCTAAAACATCAGCTTTTGCGGAACAAGCTGGTAGCAGCAGCGCGTCAAAGTTTTCGTAAAAATTCAAACTTGAGTCAATTATACCGGAACATGCAAGAGGCATATACTGAGATGCAGACTCCTTTAATTTACCAAAACCCACCAGCTGCGGGGCTGAAGGAGTTGAAAGATACCACAATCCAACTAGCTTCAAGAACTGGCTACATTGATGCTCCTGTTGATGAAACTATTTTCGATGTGGATAAAGATATTGATGATCTTCTGCCAGTGGAAGTTAAAGAACAGCGTCTCAGCAATTTGCTTCAGGCAATAATGGTTGGTGGTTGTGTTGCTGCTATGCCTCTTTTAAAGAAGATCCCGACTTCAGTTCTTTGGGGCTACTTTGCTTTCATGGCAATTGAGAGCTTGCCCGGAAATCAATTCTGGGAAAGGATTTTACTGCTTTTCACTGCTCCGAACCGAAGATACAAGGTGCTTGAGGAATATCATGCAACCTTCCTAGAAACTGTCCCCTTCAAAACAATTGCAACCTTTACCTTGTTTCAGACAGTATATCTGCTGATGTGTTTTGGTTTAACCTGGATTCCAATTGCTGGTGTTCTTTTTCCGCTGTTGATCATGCTTCTCGTCCCTGTGCGGCAGTATTTGCTCCCCAGGTTCTTCAAAGGTGCTCATCTTCAGGACTTGGATGCAGCTGAATACGAGGAAGCCCCTGCAATCGCTTTTAATCCGTCGTTCGAAGATCGAGTGGGAAGAACTCCCAACATTGATGACGGTGAAATATTCGACGAGATGATCACAAGGAGCCGTGGCGAGATTCGGCGTACGCAGAGTTCGAAAGTGACAAGCTCAACCCCAACTTCTCTAGAGGGCATCAAACCTGCATACAGCCCACAGATACCACAGAAACTGTACAGTCCAAGGATCAATGAGCTGAGAAGAGAAAGAAGTTCTCTATCTCCTGGAAAAGGACTTGACTTTAAGCTAAGTCCTCCTAGTGCAGAAGCAGGACCAGGACCATCTTTTAGAAATTAG 1542 44.23 MFALVLSFGLLLTALKSRKARSWRYGTGCLRGFIADYGVPLMVLVWTALSYIPVNNVPLGIPRRLFSPNPWSQGAYSNWTVVKEMLRVPPLYIVGAFIPATMIAVLYYFDHSVASQLAQQKEFNLKKPASYHYDLLLLGFLVILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVAAARQSFRKNSNLSQLYRNMQEAYTEMQTPLIYQNPPAAGLKELKDTTIQLASRTGYIDAPVDETIFDVDKDIDDLLPVEVKEQRLSNLLQAIMVGGCVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPNRRYKVLEEYHATFLETVPFKTIATFTLFQTVYLLMCFGLTWIPIAGVLFPLLIMLLVPVRQYLLPRFFKGAHLQDLDAAEYEEAPAIAFNPSFEDRVGRTPNIDDGEIFDEMITRSRGEIRRTQSSKVTSSTPTSLEGIKPAYSPQIPQKLYSPRINELRRERSSLSPGKGLDFKLSPPSAEAGPGPSFRN 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 69974347 69981178 - Tan0017552.2 Tan05g2005 753313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2005 513 Pfam HCO3- transporter integral membrane domain 2 171 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Tan05g2005 513 Pfam HCO3- transporter integral membrane domain 259 401 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Tan05g2005 513 PANTHER ANION EXCHANGE PROTEIN 1 437 IPR003020 GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER)
Tan05g2005 513 MobiDBLite consensus disorder prediction 445 461 - -
Tan05g2005 513 MobiDBLite consensus disorder prediction 442 513 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2004 Tan-Chr5:69974347 Tan05g2005 Tan-Chr5:69974347 1.80E-295 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2005 K24194 - csv:101203606 973.385