Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g2017 | ATGAGGAATTTGAACTGGTTCAAGCCAATTTCGATCAATGGAAAGCCTGGGAGGAGGCTTTCTCTTGGAGAGTACGAGCGGGCTGTGTCGTGGTCTAAGTACTTGGTCTCGTCTGGTGCAGAGATCAAGGGAGAGGGAGAAGAAGAATGGAGTGCAGATATGTCCCAGTTGTTCATTGGCTTCAAATTTGCTACTGGAAGGCACAGCAGGATTTACAGAGGCGTGTATAAGCAGAGGGATGTTGCAATTAAGCTGATAAGCCAGCCTGAGGAGGACGAAAACTTGGCTAACTTTCTTGAGAATCAGTTCATTTCAGAGGTGGCATTGCTGTTTCGTCTGAGACATCCCAATATCATCACTTTCATTGCAGCTTGCAAGAAGCCTCCAGTTTTTTGTATTATCACGGAGTATATGGCAGGGGGTTCGTTAAGAAAATATCTCCATCAGCAGGAGCCACATTCTGTTCCGCTCGACTTGGTTCTGAAACTAGCCCTTGACATCTCTCGTGGGATGCAGTACCTTCATTCTCAGGGAATACTTCACAGAGATCTCAAATCAGAAAATCTCTTACTAGGTGAAGATATGTGTGTTAAGGTAGCAGATTTCGGTATCTCATGCATAGAATCCCAGTGCGGAAGCGCAAAGGGATTCACCGGAACTTACCGCTGGATGGCACCTGAAATGATCAAAGAAAAACATCACACCAAGAAGGTTGATGTTTATAGCTTTGGCATTGTCTTGTGGGAGCTCTTAACTGCATTGACACCATTTGATAACATGACTCCTGAACAAGCAGCATTTGCAGTCTGCCAGAAGAATGCAAGACCCCCTCTACCTTCAGCGTGCCCACAGGCATTTCGTCATCTGATCAAGAGATGCTGGTCGAAAAATCCCAACAAGCGACCGCATTTTGACGAGATCGTTTCAATTTTGGAAACTTATATGGAGTCTTATAATGAAGATCCAGAATTTTTCTGTCACTATGTGCCTTCATCTAGATATACTGCTTTACAATGCTTACCAAAATGTATTACCAAACAATTGTCTGCTTCCCTGAAGTCTAGGAATTCATCATCTTGA | 1080 | 43.98 | MRNLNWFKPISINGKPGRRLSLGEYERAVSWSKYLVSSGAEIKGEGEEEWSADMSQLFIGFKFATGRHSRIYRGVYKQRDVAIKLISQPEEDENLANFLENQFISEVALLFRLRHPNIITFIAACKKPPVFCIITEYMAGGSLRKYLHQQEPHSVPLDLVLKLALDISRGMQYLHSQGILHRDLKSENLLLGEDMCVKVADFGISCIESQCGSAKGFTGTYRWMAPEMIKEKHHTKKVDVYSFGIVLWELLTALTPFDNMTPEQAAFAVCQKNARPPLPSACPQAFRHLIKRCWSKNPNKRPHFDEIVSILETYMESYNEDPEFFCHYVPSSRYTALQCLPKCITKQLSASLKSRNSSS | 359 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 70162549 | 70165509 | - | Tan0013799.1 | Tan05g2017 | 753325 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g2017 | 359 | Gene3D | Phosphorylase Kinase; domain 1 | 47 | 139 | - | - | |
Tan05g2017 | 359 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 179 | 191 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan05g2017 | 359 | CDD | STKc_MAP3K-like | 66 | 311 | - | - | |
Tan05g2017 | 359 | Gene3D | Transferase(Phosphotransferase) domain 1 | 140 | 355 | - | - | |
Tan05g2017 | 359 | FunFam | Serine/threonine-protein kinase isoform 1 | 47 | 139 | - | - | |
Tan05g2017 | 359 | PRINTS | Tyrosine kinase catalytic domain signature | 173 | 191 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan05g2017 | 359 | PRINTS | Tyrosine kinase catalytic domain signature | 282 | 304 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan05g2017 | 359 | PRINTS | Tyrosine kinase catalytic domain signature | 135 | 148 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan05g2017 | 359 | PRINTS | Tyrosine kinase catalytic domain signature | 238 | 260 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan05g2017 | 359 | PRINTS | Tyrosine kinase catalytic domain signature | 219 | 229 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan05g2017 | 359 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 55 | 315 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Tan05g2017 | 359 | SMART | serkin_6 | 57 | 315 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan05g2017 | 359 | ProSiteProfiles | Protein kinase domain profile. | 57 | 315 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan05g2017 | 359 | SUPERFAMILY | Protein kinase-like (PK-like) | 47 | 311 | IPR011009 | - | |
Tan05g2017 | 359 | Pfam | Protein tyrosine and serine/threonine kinase | 63 | 311 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g2260 | Tan-Chr3:76884458 | Tan05g2017 | Tan-Chr5:70162549 | 1.90E-110 | dispersed | |
Tan03g2483 | Tan-Chr3:78269237 | Tan05g2017 | Tan-Chr5:70162549 | 3.20E-97 | dispersed | |
Tan05g2017 | Tan-Chr5:70162549 | Tan05g3305 | Tan-Chr5:84958429 | 1.00E-89 | dispersed | |
Tan10g0782 | Tan-Chr10:6507989 | Tan05g2017 | Tan-Chr5:70162549 | 8.40E-21 | dispersed | |
Tan10g0783 | Tan-Chr10:6510265 | Tan05g2017 | Tan-Chr5:70162549 | 1.30E-12 | dispersed | |
Tan05g2017 | Tan-Chr5:70162549 | Tan05g2018 | Tan-Chr5:70162549 | 7.30E-160 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67632 | PF07714 | PK_Tyr_Ser-Thr | 4.10E-66 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g2017 | - | - | - | 0.0 |