Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2018 ATGAGGAATTTGAACTGGTTCAAGCCAATTTCGATCAATGGAAAGCCTGGGAGGAGGCTTTCTCTTGGAGAGTACGAGCGGGCTGTGTCGTGGTCTAAGTACTTGGTCTCGTCTGGTGCAGAGATCAAGGGAGAGGGAGAAGAAGAATGGAGTGCAGATATGTCCCAGTTGTTCATTGGCTTCAAATTTGCTACTGGAAGGCACAGCAGGATTTACAGAGGCGTGTATAAGCAGAGGGATGTTGCAATTAAGCTGATAAGCCAGCCTGAGGAGGACGAAAACTTGGCTAACTTTCTTGAGAATCAGTTCATTTCAGAGGTGGCATTGCTGTTTCGTCTGAGACATCCCAATATCATCACTTTCATTGCAGCTTGCAAGAAGCCTCCAGTTTTTTGTATTATCACGGAGTATATGGCAGGGGGTTCGTTAAGAAAATATCTCCATCAGCAGGAGCCACATTCTGTTCCGCTCGACTTGGTTCTGAAACTAGCCCTTGACATCTCTCGTGGGATGCAGTACCTTCATTCTCAGGGAATACTTCACAGAGATCTCAAATCAGAAAATCTCTTACTAGGTGAAGATATGTGTGTTAAGGTAGCAGATTTCGGTATCTCATGCATAGAATCCCAGTGCGGAAGCGCAAAGGGATTCACCGGAACTTACCGCTGGATGGCACCTGAAATGATCAAAGAAAAACATCACACCAAGAAGGTTGATGTTTATAGCTTTGGCATTGTCTTGTGGGAGCTCTTAACTGCATTGACACCATTTGATAACATGACTCCTGAACAAGCAGCATTTGCAGTCTGCCAGAAGGTAAACAGTTCCTTTCTTTTATGTTTCTTTAATCAACAATGTCAATCCTAA 867 44.18 MRNLNWFKPISINGKPGRRLSLGEYERAVSWSKYLVSSGAEIKGEGEEEWSADMSQLFIGFKFATGRHSRIYRGVYKQRDVAIKLISQPEEDENLANFLENQFISEVALLFRLRHPNIITFIAACKKPPVFCIITEYMAGGSLRKYLHQQEPHSVPLDLVLKLALDISRGMQYLHSQGILHRDLKSENLLLGEDMCVKVADFGISCIESQCGSAKGFTGTYRWMAPEMIKEKHHTKKVDVYSFGIVLWELLTALTPFDNMTPEQAAFAVCQKVNSSFLLCFFNQQCQS 288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 70162549 70165509 - Tan0013799.2 Tan05g2018 753326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2018 288 ProSiteProfiles Protein kinase domain profile. 57 288 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2018 288 Pfam Protein kinase domain 65 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2018 288 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g2018 288 Gene3D Transferase(Phosphotransferase) domain 1 140 286 - -
Tan05g2018 288 PRINTS Tyrosine kinase catalytic domain signature 238 260 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g2018 288 PRINTS Tyrosine kinase catalytic domain signature 219 229 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g2018 288 PRINTS Tyrosine kinase catalytic domain signature 135 148 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g2018 288 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g2018 288 SUPERFAMILY Protein kinase-like (PK-like) 48 276 IPR011009 -
Tan05g2018 288 Gene3D Phosphorylase Kinase; domain 1 47 139 - -
Tan05g2018 288 CDD STKc_MAP3K-like 66 272 - -
Tan05g2018 288 FunFam Serine/threonine-protein kinase isoform 1 47 139 - -
Tan05g2018 288 PANTHER SERINE-THREONINE PROTEIN KINASE 55 270 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Tan05g2018 288 SMART serkin_6 57 282 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2018 Tan-Chr5:70162549 Tan05g3305 Tan-Chr5:84958429 7.50E-75 dispersed
Tan05g2017 Tan-Chr5:70162549 Tan05g2018 Tan-Chr5:70162549 7.30E-160 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67633 PF07714 PK_Tyr_Ser-Thr 1.90E-53 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2018 - - - 0.0