Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2038 ATGACTTTCCCTTTACTTTTTCTCCTTTTTCTCATCACTATCTCGGACGTCGACTCCAAACTCACCGCCGGTTATTACCAAAAAACATGTCCTGACTTTGAGAAGATCATTCGCGAGACGGTCACCAGTAAGCAAATTACTAGCCCTGTCACTGCTGCTGGAACCCTTCGTCTTTTCTTTCATGATTGCATGGTCGATGGCTGTGATGCTTCTATCCTCATTTCCTCCAATGCCTTCAACCAAGCTGAGCGTGATGCCGATATCAATCACTCCCTCTCCGGCGACGCCTTTGATGTCGTCGTCCATGCCAAGACTAACCTCGAACTCTCCTGCCCCGGCATCGTCTCTTGTTCCGACATCTTAGCACAGGCGACTCGAGATTTGGTGGTCATGGTGGGAGGCCCATTCTACAATGTTCGATTGGGCCGAAAAGATGGGTTGATTTCAAAAGTAGGAAACGTGGAAGGGAACCTCCCAAAAGTGAGTCACACCATAGACCAACTCATTAATTTCTTCAATGCTAAAGGCTTCACCACCCAAGAATTGGTCGCCCTCTCCGGCGGCCACACCATCGGCTTCTCCCACTGCAAGGAGTTTACCGATCGCCTCTTCAATTTCAGCCCCACCTCATATACCGACCCCGACATTTACCCTAAATTCGCCGAGAAACTCAAGGCCATGTGTGCCAACTACCGAACGGACACCGCCATGTCAGCATTCAACGACGTCATGACACCTGGCAAATTCGACAACATGTACTTCCAAAACCTCGCACGTGGCCTTGGACTATTGGCCACTGACAATGCCCTCATTAAGGATCCTAGGACCAAGCCCTTTGTAGATCTTTATGCCGTTAACCAAACTGCGTTTTTTAACGACTTCGCTCACGCTATGGAGAAGCTAAGCATTTACGGCGTTAAGATGGGAAGGAAAGGGGAGGTTCGGCGAAGGTGTGACCTCTTCAATTCTATTCAAACATGA 981 49.03 MTFPLLFLLFLITISDVDSKLTAGYYQKTCPDFEKIIRETVTSKQITSPVTAAGTLRLFFHDCMVDGCDASILISSNAFNQAERDADINHSLSGDAFDVVVHAKTNLELSCPGIVSCSDILAQATRDLVVMVGGPFYNVRLGRKDGLISKVGNVEGNLPKVSHTIDQLINFFNAKGFTTQELVALSGGHTIGFSHCKEFTDRLFNFSPTSYTDPDIYPKFAEKLKAMCANYRTDTAMSAFNDVMTPGKFDNMYFQNLARGLGLLATDNALIKDPRTKPFVDLYAVNQTAFFNDFAHAMEKLSIYGVKMGRKGEVRRRCDLFNSIQT 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 70579068 70580126 + Tan0012177.1 Tan05g2038 753346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2038 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Tan05g2038 326 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g2038 326 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g2038 326 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g2038 326 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g2038 326 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g2038 326 PANTHER - 7 322 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g2038 326 Gene3D - 24 322 - -
Tan05g2038 326 CDD secretory_peroxidase 20 321 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan05g2038 326 Gene3D Peroxidase, domain 2 159 301 - -
Tan05g2038 326 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601(InterPro)
Tan05g2038 326 SUPERFAMILY Heme-dependent peroxidases 21 322 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g2038 326 FunFam Peroxidase 159 301 - -
Tan05g2038 326 ProSiteProfiles Plant heme peroxidase family profile. 20 322 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g2038 326 Pfam Peroxidase 38 285 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g2038 326 FunFam Peroxidase 24 168 - -
Tan05g2038 326 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g2038 326 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g2038 326 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g2038 326 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g2038 326 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g2038 326 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g2038 326 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g2038 326 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g2038 326 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2038 Tan-Chr5:70579068 Tan07g1310 Tan-Chr7:60975823 1.40E-109 dispersed
Tan01g3732 Tan-Chr1:102087098 Tan05g2038 Tan-Chr5:70579068 1.50E-66 transposed
Tan03g1646 Tan-Chr3:72558800 Tan05g2038 Tan-Chr5:70579068 3.30E-74 transposed
Tan05g1654 Tan-Chr5:45181190 Tan05g2038 Tan-Chr5:70579068 1.20E-71 transposed
Tan05g2473 Tan-Chr5:75917918 Tan05g2038 Tan-Chr5:70579068 4.40E-59 transposed
Tan11g0586 Tan-Chr11:5212357 Tan05g2038 Tan-Chr5:70579068 3.30E-58 wgd
Tan05g2038 Tan-Chr5:70579068 Tan09g2202 Tan-Chr9:72126561 9.30E-122 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2038 K00430 - csv:101220163 561.607