Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2077 ATGTTCAAGAAAATTCAAATGGGTTTGTTGGTTTTGGTTGTCTCATCGCTTTTACTATCAACCCTTTTCAGCTCTTGCACTCTTGCTCTTACTGCCGATGGCCTGACGTTGTTGGAAATTAGAAGCGCTTTTAATGATAGCAAAAACCTCCTTGGTGATTGGGAAGCTTCTGATGAGTCTCCCTGCAAATGGACTGGTATCTCTTGTCACCCTGAGGACCAAAGGGTCAGCTCAATTAACTTACCTTACATGCAACTAGGAGGGATTATTTCTCCCAGCATTGGTAAACTCAGTAGATTACAGAGACTGGCACTTCACCAAAATGACTTACATGGATATATTCCTAATGAAATCACTAAATGTACTCAGCTCAGAGCTCTGTATTTGAGGTCTAATTATCTCCAAGGCGGCATACCATCGGATATTGGAAACCTTTCTGCTCTTACTATACTGGATTTATCAAGCAATTCGTTGAAGGGTGCTATTCCATCATCCATTGGTCGTCTCTCACTTCTGCGCCATTTGAATTTGTCCACAAACTTTTTCTCTGGGGAAATACCAGATTTTGGAGTTCTAAGCACGTTTGGAAGCAATTCGTTCGTTGGAAATCTAGATCTCTGTGGTCATCAAGTTAACAAGGCCTGCCGGACCTCATTGGGATTCCCTGCAGTGTTGCCCCATGCTGAAAGTGATGAAGCTTCTGTGCCTGTCAAAAGACCTTCACACTACATCAAAGGGGTATTAATTGGTGCAATGTCCACTATGGGTGTTGCCCTTGTAGTGCTTGTTCCATTCTTGTGGATCCGGTGGCTATCAAAGAAGGAAAGAGCTGCCAAGAGATACACAGAAGTCAAAAAGCAAGTAGTTCATGAACCAAGCACAAAACTTATTACTTTTCATGGTGACCTACCATACCCATCATGCGAGATCATAGAAAAATTGGAGTCACTAGATGAAGAAGATGTTGTCGGTTCAGGAGGATTTGGTATTGTGTACCGTATGGTCATGAATGATTGTGGAACATTTGCTGTTAAAAAGATTGATGGAAGCAGAAAAGGTTCAGACCAAGTATTTGAGAGAGAGTTGGAGATTTTGGGTTGCATCAAACATATAAACTTGGTCAATTTGCGGGGATATTGTAGTCTTCCAACTTCAAAGCTTCTTATCTATGACTTTCTTGCCATGGGCAGCTTAGATGATTTCTTGCATGAACAGGGTCCAGACAAACAGCCTTTGGATTGGAGAGCTCGTTTAAGGATAGCCTTGGGCTCTGCTAGGGGGATTGCGTACTTGCATCATGATTGTTGTCCAAAGATCGTGCATCGTGATATTAAATCGAGTAACATTCTTCTTGATGAAAACTTGGAGCCCCATGTATCCGACTTTGGACTGGCCAAACTTTTGGTTGACGAGGATGCTCATGTCACAACTGTTGTTGCTGGAACATTTGGTTATTTGGCTCCAGAATACCTACAAAGTGGAAGAGCAACTGAAAAATCAGATGTTTATAGCTTTGGAGTTTTGTTACTGGAGCTGGTGACTGGGAAGAGACCAACTGATCCATCATTTGTAAAGAGAGGCTTGAATGTTGTTGGTTGGATGCACACTTTACTGGGAGAAAACAAAATGGATGAGATAGTTGACAAAAGGTGCAAGGACGTCGATGCTGATACTGTAGAAGCAATTCTTGAAATAGCAGCCAAATGCACGGATGCCGACCCGGACAATCGGCCATCAATGAGTCAAGTTTTGCAGTTCCTAGAGCAAGAAGTCATGTCACCATGTCCTAGTGATTTCTACGAGTCTCATTCTGATTATTCTTGA 1824 42.32 MFKKIQMGLLVLVVSSLLLSTLFSSCTLALTADGLTLLEIRSAFNDSKNLLGDWEASDESPCKWTGISCHPEDQRVSSINLPYMQLGGIISPSIGKLSRLQRLALHQNDLHGYIPNEITKCTQLRALYLRSNYLQGGIPSDIGNLSALTILDLSSNSLKGAIPSSIGRLSLLRHLNLSTNFFSGEIPDFGVLSTFGSNSFVGNLDLCGHQVNKACRTSLGFPAVLPHAESDEASVPVKRPSHYIKGVLIGAMSTMGVALVVLVPFLWIRWLSKKERAAKRYTEVKKQVVHEPSTKLITFHGDLPYPSCEIIEKLESLDEEDVVGSGGFGIVYRMVMNDCGTFAVKKIDGSRKGSDQVFERELEILGCIKHINLVNLRGYCSLPTSKLLIYDFLAMGSLDDFLHEQGPDKQPLDWRARLRIALGSARGIAYLHHDCCPKIVHRDIKSSNILLDENLEPHVSDFGLAKLLVDEDAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPSFVKRGLNVVGWMHTLLGENKMDEIVDKRCKDVDADTVEAILEIAAKCTDADPDNRPSMSQVLQFLEQEVMSPCPSDFYESHSDYS 607
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 71201561 71206972 + Tan0017652.1 Tan05g2077 753385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2077 607 Pfam Protein kinase domain 320 585 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2077 607 SMART serkin_6 317 592 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2077 607 SUPERFAMILY Protein kinase-like (PK-like) 297 588 IPR011009 -
Tan05g2077 607 Gene3D Phosphorylase Kinase; domain 1 276 392 - -
Tan05g2077 607 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 187 590 IPR050647 -
Tan05g2077 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g2077 607 Pfam Leucine rich repeat N-terminal domain 32 69 IPR013210 -
Tan05g2077 607 ProSiteProfiles Protein kinase domain profile. 317 592 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2077 607 Gene3D Transferase(Phosphotransferase) domain 1 393 596 - -
Tan05g2077 607 Pfam Leucine Rich Repeat 123 145 IPR001611 GO:0005515(InterPro)
Tan05g2077 607 Pfam Leucine Rich Repeat 148 169 IPR001611 GO:0005515(InterPro)
Tan05g2077 607 Pfam Leucine Rich Repeat 172 188 IPR001611 GO:0005515(InterPro)
Tan05g2077 607 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Tan05g2077 607 Gene3D Ribonuclease Inhibitor 31 217 IPR032675 -
Tan05g2077 607 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 30 192 - -
Tan05g2077 607 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 393 598 - -
Tan05g2077 607 ProSitePatterns Protein kinases ATP-binding region signature. 323 346 IPR017441 GO:0005524(InterPro)
Tan05g2077 607 SUPERFAMILY L domain-like 32 211 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2077 Tan-Chr5:71201561 Tan10g1711 Tan-Chr10:43391278 4.90E-76 dispersed
Tan10g1269 Tan-Chr10:14433395 Tan05g2077 Tan-Chr5:71201561 7.80E-50 dispersed
Tan01g1044 Tan-Chr1:10243473 Tan05g2077 Tan-Chr5:71201561 1.30E-132 transposed
Tan01g4113 Tan-Chr1:105970613 Tan05g2077 Tan-Chr5:71201561 1.60E-136 transposed
Tan01g4240 Tan-Chr1:107205316 Tan05g2077 Tan-Chr5:71201561 1.70E-81 transposed
Tan05g2077 Tan-Chr5:71201561 Tan09g2164 Tan-Chr9:71719720 1.90E-224 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67635 PF00069 Pkinase 4.00E-47 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2077 - - - 0.0