Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2088 ATGGCGCCTGTTTTATCTCGATTACTTTTCCGACGGAATGTTCAGGCTCCATTTCTCCGCACCTCCACTGGCTTTAACTTTTGCAGAGAAGTTCATTCTTTACTTTTCTCGTCGATAGAAGCGGACCAACTCTCAGGTTCTAAGCCAGGAGAAGTTCAGAACTTGGTGCAGGGTAAATGGATTGGATCTTCCGGTTGGAATACTATTCTGGACCCTTTAAATGGAGAACCATTCATTAAAGTTGCTGAAGTCGATGGAACAGAAATTCAGCCATTTGTGAAGAGTCTGACCAAATGCCCCAAACATGGCTTGCATAATCCTTTTAAATCACCCGAGAGATATCTTTTGTTGGGAGATGTTTCTTCCAAGGCTGCCAACATGCTTTCCAAGCCAGAGGTGACTGACTTCTTCGCGAGGTTAATTCAAAGAGTTTCTCCAAAAAGTTATCAGCAAGCTTGTGCTGAAGTAAATGTTACTGTAAAATTTCTACGGAACTTCTCCGGCGATCAGGTTCGCTTCCTTGCAAGGTCCTTTGCAGTACCGGGTGATCATCTTGGACAACATAGTCATGGTTTTCGTTGGCCTTATGGTCCTGTTGCAATCGTCACTCCTTTCAACTTTCCCTTAGAAATTCCTGTACTTCAGGTGATGGGTGCACTTTATATGGGCAACAAACCTGTTTTAAAAGTTGATAGCAAGGTTAGCATAGTTATGGAGCAAATGATTCGATTGCTGCACCATTGTGGGCTCCCTCTGGAAGATTTAGATTTTATAAATTGTGATGGGAAGACAATGAACAGATTCCTGCTTGAGGCAAATCCATCTATGACTCTTTTCACCGGTAGCTCGAGGGTGGCAGAGAAGTTAGCCGTTGACTTGAAGGGCCGCATTAAATTGGAAGATGCAGGTTTTGATTGGAAAATCTTAGGACCAGATGTTCAAGAGGAAGATTATATTGCTTGGGTTTGTGATCAAGATGCATACGCTTGTAGTGGTCAGAAGTGCTCGGCACAGTCGATACTGTTCATGCATGAGAACTGGTCAGCAACTTCACTTATTTCGAAGATAAAGGATCTTGCGGAGAGAAGAAATTTGACTGATTTAACGATTGGTCCAGTCCTTACCCTCACTAATGAAATGATACTAGATCACATGAATAAATTGCTCAAGATACCAGGGGCAAAGTTACTCTTTGGAGGTGAACCTCTTAAAAATCATTCCATTCCACCCATATATGGCGCTATAAAGCCCACCGCAGTTTATATTCCGCTCGAAGAAATGATGAAAGATGACTATTATGAGCTTGTGACTAAAGAAATCTTTGGACCATTCCAGGTTATTACTGAATATAAGAAAGATCAACTTTCAATTGTGTTGGATGCACTTGAGCGGATGCATGCTCATCTAACAGCAGCTGTTGTTTCAAATGACCCACTTTTTTTGCAGGAAGTTATTGGCAATACCGTGAATGGAACCACATATGCTGGTTTACGAGCAAGAACAACTGGAGCTCCACAAAACCATTGGTTTGGACCAGCAGGAGATCCGAGAGGTGCAGGAATCGGGACCCCAGAAGCGATCAAACTCGTATGGTCTTGCCATAGGGAGATCATATATGACAATGGCCCTTTGCCCTTGCACTGGACAATCCCACCTTCTACTTGA 1665 42.94 MAPVLSRLLFRRNVQAPFLRTSTGFNFCREVHSLLFSSIEADQLSGSKPGEVQNLVQGKWIGSSGWNTILDPLNGEPFIKVAEVDGTEIQPFVKSLTKCPKHGLHNPFKSPERYLLLGDVSSKAANMLSKPEVTDFFARLIQRVSPKSYQQACAEVNVTVKFLRNFSGDQVRFLARSFAVPGDHLGQHSHGFRWPYGPVAIVTPFNFPLEIPVLQVMGALYMGNKPVLKVDSKVSIVMEQMIRLLHHCGLPLEDLDFINCDGKTMNRFLLEANPSMTLFTGSSRVAEKLAVDLKGRIKLEDAGFDWKILGPDVQEEDYIAWVCDQDAYACSGQKCSAQSILFMHENWSATSLISKIKDLAERRNLTDLTIGPVLTLTNEMILDHMNKLLKIPGAKLLFGGEPLKNHSIPPIYGAIKPTAVYIPLEEMMKDDYYELVTKEIFGPFQVITEYKKDQLSIVLDALERMHAHLTAAVVSNDPLFLQEVIGNTVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDNGPLPLHWTIPPST 554
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 71279114 71291307 - Tan0020481.1 Tan05g2088 753396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2088 554 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 45 303 IPR016162 GO:0016491(InterPro)
Tan05g2088 554 FunFam probable aldehyde dehydrogenase 45 303 - -
Tan05g2088 554 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 495 IPR016163 GO:0016620(InterPro)
Tan05g2088 554 FunFam Aldehyde dehydrogenase 12 311 499 - -
Tan05g2088 554 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 51 548 IPR044638 GO:0003842(PANTHER)|GO:0004029(InterPro)|GO:0005739(PANTHER)|GO:0010133(PANTHER)
Tan05g2088 554 Pfam Aldehyde dehydrogenase family 70 495 IPR015590 GO:0016491(InterPro)
Tan05g2088 554 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 328 339 IPR016160 GO:0016491(InterPro)
Tan05g2088 554 SUPERFAMILY ALDH-like 52 522 IPR016161 GO:0016491(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2088 K00294 - csv:101214440 1050.04