Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2138 ATGGAGGAGAAAGGAGTCGAGGATCATGTAGTGAAGGGTTTGAATTGTGAACGCGATCCAAATCAGAAGAGCAGGCAGAGATTTGGGGGAGTAGGTGGAGTTCTATCGATCGAGGAGTTCTTTGAGGACCGAGAAGTGCCCTCGTGGAGGAAGCAGCTAACCTTTAGGGCCTTTTTCGTCAGTTTTTGGCTGAGCATTTTGTTCAGCTTCATTGTAATGAAGCTCAATCTGACCACTGGTATTATACCTTCACTCAACGTATCTGCTGGTCTATTAGGTTTCTTCTTTGTTAAATCGTGGACGAAATTTTTGGAGAGATCAGGCCTCTTGAGGCAGCCTTTCACTAGGCAGGAGAACACCGTCATCCAAACCTGTGTTGTTGCCTCGTCTGGCATCGCTTTCAGCGGAGGTTTTGGAAGTTACTTATTTGGAATGAGCGAACGGATTGCTCATAAATCATCAGGCAGTAAAGATTACAAGGATCCATCATTAGGATGGATGATTGGTTTTCTATTTGTTGTTAGCTTTCTTGGCCTCTTCTCAGTTGTACCCTTGCGAAAGATCATGGTCATAGACTTCAAATTAACTTATCCAAGTGGTACTGCAACTGCTCATTTGATTAATAGTTTCCATACTCCCCGAGGAGCTGCCCTAGCAAAGAAACAAGTGAGACTGCTTGGCAGATTTTTCTCTGTGAGCTTCTTGTGGGGCTTCTTTCAATGGTTCTTTACAACTGCAGATGGTTGTGGGTTTGCACATTTTCCAACATTTGGGCTCAAAGCATATGCACACAAGTTTTACTTTGACTTCTCAACAACATATATTGGAGTAGGGATGATTTGCCCCCACATAATAAATGTATCGGTGCTTGTTGGAGGAATTATCTCTTGGGGCATAATGTGGCCTCTCATAGAAGATAAAAAGGGTCAATGGTATAGCGAGAAATTGAGCTCAGATGACCTAAGTGGACTTCAAGGTTACAAGGTATTTATAGCAATAGCCATAATTCTTGGTGATGGCCTGTACAACTTCTTCAAAGTATTGACTCGGACCCTTTCCGGATTGCTCTACCAACTTCAACACAAAAGAGAGACTGAAGATTTTTCCTCGGAAAATTCATCCAGGTCTGAGTTATCTTATGATGATGAACGAAGGAAACAACTTTTTCTGAAGGATCAAATACCAATCTGGCTTGCCATTGGAGGCTATGTTGTAATTGCTGTAGTGTCGATTAACACTCTTCCACACATCTTTACCCAGCTGAAGTGGTATTATATTTTGGTCATCTACACCTTTGCTCCTGTCTTGGCCTTCTGTAATGCATATGGATGTGGACTCACGGATTGGTCTTTGGCATCCACTTATGGAAAGCTTGCCATTTTCACAATTGGTGCCTGGGCTGGGCCTTTGCATGGGGGAGTTATTGCTGGTCTATCAGCTTGTGGGGTCATGATGAATATTGTCTCCACTGCCTCTGACCTAATGCAGGATTTCAAGACTGGCTATCTAACTTTGGCTTCACCACGCTCCATGTTTGTCAGCCAAGTAGTAGGTACAACAATGGGCTGCATTATTTCCCCTTGTGTCTTTTGGCTCTTTTACAAGGCATTTGATGATCTTGGTCTTCCAACTGGTGAATACCCTGCCCCTAATGCCGTTCTTTTTCGCAACATGTCCGTGTTGGGTGTTGAAGGCGTCTCGAGTCTACCAAAGAATTGTCTTACCCTTTGTTACGTGTTTTTTGCCACCTCAATTTTGATTAACTTGATTAAAGACTTGATACCAAAAAAGTGGGCAAGGTTCATTCCCCTACCTATGGCAATGGCAATACCATTCTATATAGGGCCGTACTTTGCAATTGATATGAGCCTTGGAAGTTTGATATTGTTTGTGTGGCAGAAGTTAAACAAAACCAAGGCCGATGCCTTTGGTCCTGCTGTAGCATCTGGTTTGATATGTGGAGACGGGATTTGGACGCTGCCTAATTCAATTTTGGCTTTGGCGGGAGTCAAGGCACCAATTTGCATGAAGTTTCTATCAAGGTCAGCCAACACAAAAGTAGATAAGTTCCTAAGTTCGTCGATCTGA 2088 43.2 MEEKGVEDHVVKGLNCERDPNQKSRQRFGGVGGVLSIEEFFEDREVPSWRKQLTFRAFFVSFWLSILFSFIVMKLNLTTGIIPSLNVSAGLLGFFFVKSWTKFLERSGLLRQPFTRQENTVIQTCVVASSGIAFSGGFGSYLFGMSERIAHKSSGSKDYKDPSLGWMIGFLFVVSFLGLFSVVPLRKIMVIDFKLTYPSGTATAHLINSFHTPRGAALAKKQVRLLGRFFSVSFLWGFFQWFFTTADGCGFAHFPTFGLKAYAHKFYFDFSTTYIGVGMICPHIINVSVLVGGIISWGIMWPLIEDKKGQWYSEKLSSDDLSGLQGYKVFIAIAIILGDGLYNFFKVLTRTLSGLLYQLQHKRETEDFSSENSSRSELSYDDERRKQLFLKDQIPIWLAIGGYVVIAVVSINTLPHIFTQLKWYYILVIYTFAPVLAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGPLHGGVIAGLSACGVMMNIVSTASDLMQDFKTGYLTLASPRSMFVSQVVGTTMGCIISPCVFWLFYKAFDDLGLPTGEYPAPNAVLFRNMSVLGVEGVSSLPKNCLTLCYVFFATSILINLIKDLIPKKWARFIPLPMAMAIPFYIGPYFAIDMSLGSLILFVWQKLNKTKADAFGPAVASGLICGDGIWTLPNSILALAGVKAPICMKFLSRSANTKVDKFLSSSI 695
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 72119501 72124233 + Tan0022478.1 Tan05g2138 753446

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2138 695 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 36 682 IPR045035 GO:0016020(PANTHER)|GO:0035673(InterPro)
Tan05g2138 695 Pfam OPT oligopeptide transporter protein 52 665 IPR004813 GO:0035673(InterPro)
Tan05g2138 695 NCBIfam OPT family oligopeptide transporter 49 666 IPR004813 GO:0035673(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2138 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2365 Tan-Chr4:82171621 Tan05g2138 Tan-Chr5:72119501 1.10E-244 dispersed
Tan05g2138 Tan-Chr5:72119501 Tan11g0091 Tan-Chr11:1030776 6.70E-303 dispersed
Tan05g2138 Tan-Chr5:72119501 Tan05g2139 Tan-Chr5:72119501 0.00E+00 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g954 . . . . . . . . . Cmo18g00078 . . . . . Cpe20g00180 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Sed08g2805 . . Cma13g00959 Cma18g00101 Car13g00795 Car18g00091 . . Bhi08g01350 Tan05g2138 Cmetu04g2126 Lac10g0326 Hepe07g2321 . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001400 2 2 2 3 2 2 3 2 2 3 2 2 3 3 3 3 2 1 3 2 3 2 2 1 2 3 2 6 4 2 74