Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g2167 | ATGGCTCTGGTTCGTGATCGCCGCCAGTTGAACCTCCGCCTCCCCGACCTCTCCGACTGCCGTCCTCGCTTCCCCCTCCCCCCCCTCCTCCCCTCCTCCTCCGCCCCTGCCCCCGCCGCCTCCCCCGCCATCTCCTCCGCCGACCTCGACAAGCTCCAAGTCCTCGGCCACGGCAACGGCGGCACCGTCTACAAAGTCCGCCACAAGCGCACCTCCACTACCTACGCTCTCAAGGTCGTCCACGGCGACTGCGATCCCACCGTTCGCCGCCAGGTTTTCAGAGAGATGGAGATTCTCCGCCGTACGGACTCTCCCTACGTCGTTCAGTGCCATGGAATCTTCGAGAAGCCGTCTGGAGATGTCACGATTTTGATGGAGTATATGGATCGAGGATCGCTTGATTCGCTCTTGAAGAAGAACTCCACGTTGTCAGAGGCGACGCTCGCTCACGTATCGCGTCAGGTTCTTAACGGCCTTCACTACCTTCACTCTCATAAAATCATTCATCGCGATATTAAACCGTCGAATCTGTTGGTGAATAAGAATATGGAGGTTAAGATTGCCGATTTTGGAGTTAGTAAAATCATGTGCAGGACTCTGGATGCCTGTAATTCCTACGTCGGAACCTGCGCTTATATGAGTCCGGAGCGGTTCGATCCGGAGACTTACGGCGGGAATTACAACGGTTACGCCGGAGACATATGGAGTTTAGGCCTTACTCTTCTCGAACTCTATTTAGGCCATTTTCCTTTTCTTCCGCCTGGTCAGAGACCGGATTGGGCGACTCTGATGTGTGCGATTTGCTTCAGTGAGCCGCCGACGCTGCCGAAGGATGCGTCGGAGGACTTTCGGAGCTTCGTCGAGTGTTGTTTGCAGAAGGAATCGAGTAAGAGGTGGACGGCGGCGCAATTGTTGACGCATCCGTTTGTCTGCAAGGAACCGAGATCCGATCGGTGA | 957 | 55.8 | MALVRDRRQLNLRLPDLSDCRPRFPLPPLLPSSSAPAPAASPAISSADLDKLQVLGHGNGGTVYKVRHKRTSTTYALKVVHGDCDPTVRRQVFREMEILRRTDSPYVVQCHGIFEKPSGDVTILMEYMDRGSLDSLLKKNSTLSEATLAHVSRQVLNGLHYLHSHKIIHRDIKPSNLLVNKNMEVKIADFGVSKIMCRTLDACNSYVGTCAYMSPERFDPETYGGNYNGYAGDIWSLGLTLLELYLGHFPFLPPGQRPDWATLMCAICFSEPPTLPKDASEDFRSFVECCLQKESSKRWTAAQLLTHPFVCKEPRSDR | 318 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 72452973 | 72454450 | + | Tan0002861.1 | Tan05g2167 | 753475 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g2167 | 318 | SMART | serkin_6 | 49 | 310 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan05g2167 | 318 | SUPERFAMILY | Protein kinase-like (PK-like) | 50 | 312 | IPR011009 | - | |
Tan05g2167 | 318 | Pfam | Protein kinase domain | 51 | 310 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan05g2167 | 318 | Gene3D | Transferase(Phosphotransferase) domain 1 | 131 | 317 | - | - | |
Tan05g2167 | 318 | ProSiteProfiles | Protein kinase domain profile. | 49 | 310 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan05g2167 | 318 | CDD | PKc_MAPKK_plant_like | 48 | 310 | - | - | |
Tan05g2167 | 318 | FunFam | Mitogen-activated protein kinase 2 | 130 | 318 | - | - | |
Tan05g2167 | 318 | PRINTS | Tyrosine kinase catalytic domain signature | 161 | 179 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan05g2167 | 318 | PRINTS | Tyrosine kinase catalytic domain signature | 232 | 254 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan05g2167 | 318 | PRINTS | Tyrosine kinase catalytic domain signature | 125 | 138 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan05g2167 | 318 | Gene3D | Phosphorylase Kinase; domain 1 | 34 | 129 | - | - | |
Tan05g2167 | 318 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 167 | 179 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan05g2167 | 318 | PANTHER | DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED | 40 | 312 | - | GO:0000165(PANTHER)|GO:0004708(PANTHER) | |
Tan05g2167 | 318 | ProSitePatterns | Protein kinases ATP-binding region signature. | 55 | 78 | IPR017441 | GO:0005524(InterPro) | |
Tan05g2167 | 318 | FunFam | Mitogen-activated protein kinase kinase | 30 | 125 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g2825 | Tan-Chr4:87704411 | Tan05g2167 | Tan-Chr5:72452973 | 1.70E-82 | dispersed | |
Tan05g2167 | Tan-Chr5:72452973 | Tan09g1114 | Tan-Chr9:63452776 | 1.70E-59 | dispersed | |
Tan05g2167 | Tan-Chr5:72452973 | Tan08g0048 | Tan-Chr8:531752 | 1.50E-63 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67640 | PF00069 | Pkinase | 6.70E-66 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g2167 | K20604 | - | csv:101203133 | 575.859 |