Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g2201 | ATGAAGAACCTCCTCAAGAAGTTCCATATCATGTCCAGTGGTCAGTCAGACGATGCAGCAGAAGGGTCTACTTCATCGAGGGGCAGTAAATTAATTGAGTTTTCATCGCCTGATAAGCTGCCATCTCGCTCTCGGCCGACCCATTTTAATTCGGAGCATAAACCCTTCTCGGGGATTTCCGGTTGGTTGAACTCTGTTACAAATAGGCGTAGCCCCAGCCCTCCATCATCTTCGAATCCCACTGCAGGGGAGATAATGGAGCCATCTGATTCAGTATCTAGCAGAGATGCTGCAATGGATGCATCAAGGCATGATTCAGGGTCGAGTAACTCGAGGGATCCTGATATAGAGGAAGAGTATCAGATACAGCTTGCTTTGGAAATGAGTGCCAGAGAGGATCCTGAGGCGGCTCAGATTGAGGCTGTGAAGCAGATTAGTTTGGGGTCATGTGATCCTGATAACACTCCAGCTGAAGTTATTGCCTTCAGATACTGGAATTACAATTCTCTTAGCTATGATGACAAGATCTTGGATGGCTTTTATGACCTATATGGAGTCTTTACCAAGTCCATCTCTGAAAGAATGCCTTCCCTAGTTGATCTGCAAGGAGCACCAATGTCTGACAGTGTCACTTGGGAAGCAGTTCTGATCAATAAAGCTGCTGATGCTAACTTATTGAAACTTGAACAGACAGCATTGGAGATGGCCATCAAAGTGAGGTCGGAGTCTCCAATTTCTGTAAATAGTTATTTGGTGCGGAAGCTTGCTGTTTTAGTTTCGGATCATATGGGGGGACCAGTGGGGGATCCTGAAAAGATGTTGAGAAAATGGAGAAATCTTAGTTACAGCTTGAAAGCAACCCTTGGTAGTATGGTTTTGCCTCTTGGCTCCCTTACTGTAGGGTTGGCCCGTCATCGTGCATTGTTATTCAAGCTTTTGGCGGATGGTGTGGATATCCCTTGTAGGTTGGTGAAAGGGCCAGAGTATACAGGTTCTGATGATGTGGCAATGAACTTCGTAAAGATTGATGATGGAAGGGAGTTCATTGTGGATTTAATGGCAGATCCTGGTACACTTATTCCAGCTGATGTTGCTGGATCGCATGTAGAGTATGATGAATCCCCTTTTTCAGCCAGTCCACTTTCTAGAGATGTTGATTCCTCTCAGGCAGCCTCTTCAAGCAGTGGGGTTGGCAGTTCGTTAGAGGAAAATTCAGACTTTGGGACATCAGATCGGAAACCAAAGTCCCGAAATTTCAGTGCCACAAAGGAATATGATCCTCCCAATGTTGACAAGGGGCTATCACGTGATTTTGCTAGCAAACCAAATTATCCTGGCATGCACGTTAGATCACCTTCTTGGACTGAAGGTGTTAGTTCACCTGCAGTGCGCAGAATGAAAGTAAAGGATGTTTCACAATACATGATTGATGCTGCCAAAGAGAATCCACGCCTGGCTCAGAAGCTTCATGATGTGTTGCTTGAAAGCGGTGTAGTTGCACCCCCTAACTTGTTTACCGAGGCATACCCTGATCAAATAGATGTTATTGTTGAGTCTAAGCCACCAACTGAAGACAGGGATCAAAATAGAAAGGTGCCCGGTCTATGTGAAAGTGTAGATAAGAAAGATCCTCGTCCAGCTAACTTTTTGCCTCCTTTGCCTCAGCCCAGACTGCATCCTAAAGCAAGCCCTACACATGGCCAACAACAGCATCTTAAACCTCTGGAACTCAACCTCTCTCTTGATTCAAGAGAAGCAGTCGGACAACCTATAGCCTTACCATTTGAGGTAACTCCAGTGAAGTATGGGAGAAATGTACCTGTTGCTGCAGCAGCAGCAGCTGCTGCAGCTGTTGTTGCATCATCAATGGTAGTAGCTGCAGCAAAGAGTACTGATGCAAATCTTGAAATTCCTGTAGCAGCTGCTGCCACTGCCACTGCTGCTGCAGTGGTTGCAACAACTGCCGCAGTCAACAAGCAGTATGAGCAGGCTGAGGCTGATGCTGCTCTTTATGAGCAGCGTGGAAGTGGAGATAGGGAGCATGATGCTTATGGAGAAAATTCAGAGGGTGAACGAATATCAGACAGATCAGCAGGGAATGAAAGCACAAAATCCGATATTACCCTTGACGACGTTGCAGAATGCGAGATCCCATGGGAAGAAATCTCCTTGGGAGAGCGTATTGGACTTGGGTCTTACGGGGAGGTCTATCGTGGAGATTGGCATGGAACTGAGGTAGCTGTGAAGAGGTTTCTAGACCAGGATATTTCGGGTGAATCTCTTGAAGAATTCAAAAGTGAGGTACGAATTATGAAAAGGCTTCGGCATCCAAATGTTGTTCTCTTCATGGGAGCTGTGACACGTGCTCCCAATCTTTCAATTGTTACAGAATTTCTTCCCAGAGGTAGCTTGTACAGGTTAATTCACCGTCCCAACAATCAATTAGATGAACGAAAGCGTTTGAGAATGGCCCTCGATGCAGCTCGGGGAATGAATTATTTGCACAATTGCACACCTGTCATTGTACATCGCGATTTGAAGTCCCCAAATCTTCTTGTTGATAAAAATTGGGTTGTGAAGGTATGCGATTTTGGTTTATCAAAAATGAAGCATAGCACATTTCTTTCTTCAAGGTCAACAGCTGGAACGGCTGAGTGGATGGCTCCAGAAGTGTTGAGAAATGAACCTTCAGATGAAAAGTGTGACGTTTATAGTTACGGAGTTATTCTGTGGGAGCTTTCTACAATGCAACAACCATGGGGAGGAATGAACCCGATGCAAGTTGTTGGTGCTGTTGGCTTTCAGCATCGCCGTCTTGACATCCCTGACAATATGGATCCTGCCATTGCTGACATTATAAGGAAATGCTGGCAAACCTAA | 2880 | 45.49 | MKNLLKKFHIMSSGQSDDAAEGSTSSRGSKLIEFSSPDKLPSRSRPTHFNSEHKPFSGISGWLNSVTNRRSPSPPSSSNPTAGEIMEPSDSVSSRDAAMDASRHDSGSSNSRDPDIEEEYQIQLALEMSAREDPEAAQIEAVKQISLGSCDPDNTPAEVIAFRYWNYNSLSYDDKILDGFYDLYGVFTKSISERMPSLVDLQGAPMSDSVTWEAVLINKAADANLLKLEQTALEMAIKVRSESPISVNSYLVRKLAVLVSDHMGGPVGDPEKMLRKWRNLSYSLKATLGSMVLPLGSLTVGLARHRALLFKLLADGVDIPCRLVKGPEYTGSDDVAMNFVKIDDGREFIVDLMADPGTLIPADVAGSHVEYDESPFSASPLSRDVDSSQAASSSSGVGSSLEENSDFGTSDRKPKSRNFSATKEYDPPNVDKGLSRDFASKPNYPGMHVRSPSWTEGVSSPAVRRMKVKDVSQYMIDAAKENPRLAQKLHDVLLESGVVAPPNLFTEAYPDQIDVIVESKPPTEDRDQNRKVPGLCESVDKKDPRPANFLPPLPQPRLHPKASPTHGQQQHLKPLELNLSLDSREAVGQPIALPFEVTPVKYGRNVPVAAAAAAAAAVVASSMVVAAAKSTDANLEIPVAAAATATAAAVVATTAAVNKQYEQAEADAALYEQRGSGDREHDAYGENSEGERISDRSAGNESTKSDITLDDVAECEIPWEEISLGERIGLGSYGEVYRGDWHGTEVAVKRFLDQDISGESLEEFKSEVRIMKRLRHPNVVLFMGAVTRAPNLSIVTEFLPRGSLYRLIHRPNNQLDERKRLRMALDAARGMNYLHNCTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSKMKHSTFLSSRSTAGTAEWMAPEVLRNEPSDEKCDVYSYGVILWELSTMQQPWGGMNPMQVVGAVGFQHRRLDIPDNMDPAIADIIRKCWQT | 959 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 72948055 | 72962228 | - | Tan0008082.2 | Tan05g2201 | 753509 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g2201 | 959 | Pfam | Protein tyrosine and serine/threonine kinase | 723 | 958 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan05g2201 | 959 | MobiDBLite | consensus disorder prediction | 673 | 699 | - | - | |
Tan05g2201 | 959 | MobiDBLite | consensus disorder prediction | 16 | 32 | - | - | |
Tan05g2201 | 959 | MobiDBLite | consensus disorder prediction | 380 | 405 | - | - | |
Tan05g2201 | 959 | FunFam | PAS domain-containing protein tyrosine kinase family protein | 800 | 959 | - | - | |
Tan05g2201 | 959 | ProSitePatterns | Protein kinases ATP-binding region signature. | 728 | 749 | IPR017441 | GO:0005524(InterPro) | |
Tan05g2201 | 959 | MobiDBLite | consensus disorder prediction | 373 | 457 | - | - | |
Tan05g2201 | 959 | Gene3D | Transferase(Phosphotransferase) domain 1 | 801 | 959 | - | - | |
Tan05g2201 | 959 | MobiDBLite | consensus disorder prediction | 1 | 116 | - | - | |
Tan05g2201 | 959 | SUPERFAMILY | Protein kinase-like (PK-like) | 705 | 958 | IPR011009 | - | |
Tan05g2201 | 959 | MobiDBLite | consensus disorder prediction | 673 | 707 | - | - | |
Tan05g2201 | 959 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 157 | 360 | - | - | |
Tan05g2201 | 959 | FunFam | Serine/threonine-protein kinase isoform 1 | 713 | 800 | - | - | |
Tan05g2201 | 959 | Gene3D | Phosphorylase Kinase; domain 1 | 715 | 799 | - | - | |
Tan05g2201 | 959 | SMART | serkin_6 | 722 | 959 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan05g2201 | 959 | MobiDBLite | consensus disorder prediction | 97 | 116 | - | - | |
Tan05g2201 | 959 | MobiDBLite | consensus disorder prediction | 519 | 544 | - | - | |
Tan05g2201 | 959 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 841 | 853 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan05g2201 | 959 | CDD | STKc_MAP3K-like | 728 | 959 | - | - | |
Tan05g2201 | 959 | ProSiteProfiles | Protein kinase domain profile. | 722 | 959 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan05g2201 | 959 | MobiDBLite | consensus disorder prediction | 519 | 570 | - | - | |
Tan05g2201 | 959 | MobiDBLite | consensus disorder prediction | 51 | 88 | - | - | |
Tan05g2201 | 959 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 70 | 959 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Tan05g2201 | 959 | Coils | Coil | 654 | 674 | - | - | |
Tan05g2201 | 959 | MobiDBLite | consensus disorder prediction | 406 | 420 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan05g2201 | Tan-Chr5:72948055 | Tan09g0553 | Tan-Chr9:49097452 | 6.90E-157 | dispersed | |
Tan05g2200 | Tan-Chr5:72948055 | Tan05g2201 | Tan-Chr5:72948055 | 0.00E+00 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67643 | PF07714 | PK_Tyr_Ser-Thr | 7.70E-62 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g2201 | - | - | - | 0.0 |