Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2201 ATGAAGAACCTCCTCAAGAAGTTCCATATCATGTCCAGTGGTCAGTCAGACGATGCAGCAGAAGGGTCTACTTCATCGAGGGGCAGTAAATTAATTGAGTTTTCATCGCCTGATAAGCTGCCATCTCGCTCTCGGCCGACCCATTTTAATTCGGAGCATAAACCCTTCTCGGGGATTTCCGGTTGGTTGAACTCTGTTACAAATAGGCGTAGCCCCAGCCCTCCATCATCTTCGAATCCCACTGCAGGGGAGATAATGGAGCCATCTGATTCAGTATCTAGCAGAGATGCTGCAATGGATGCATCAAGGCATGATTCAGGGTCGAGTAACTCGAGGGATCCTGATATAGAGGAAGAGTATCAGATACAGCTTGCTTTGGAAATGAGTGCCAGAGAGGATCCTGAGGCGGCTCAGATTGAGGCTGTGAAGCAGATTAGTTTGGGGTCATGTGATCCTGATAACACTCCAGCTGAAGTTATTGCCTTCAGATACTGGAATTACAATTCTCTTAGCTATGATGACAAGATCTTGGATGGCTTTTATGACCTATATGGAGTCTTTACCAAGTCCATCTCTGAAAGAATGCCTTCCCTAGTTGATCTGCAAGGAGCACCAATGTCTGACAGTGTCACTTGGGAAGCAGTTCTGATCAATAAAGCTGCTGATGCTAACTTATTGAAACTTGAACAGACAGCATTGGAGATGGCCATCAAAGTGAGGTCGGAGTCTCCAATTTCTGTAAATAGTTATTTGGTGCGGAAGCTTGCTGTTTTAGTTTCGGATCATATGGGGGGACCAGTGGGGGATCCTGAAAAGATGTTGAGAAAATGGAGAAATCTTAGTTACAGCTTGAAAGCAACCCTTGGTAGTATGGTTTTGCCTCTTGGCTCCCTTACTGTAGGGTTGGCCCGTCATCGTGCATTGTTATTCAAGCTTTTGGCGGATGGTGTGGATATCCCTTGTAGGTTGGTGAAAGGGCCAGAGTATACAGGTTCTGATGATGTGGCAATGAACTTCGTAAAGATTGATGATGGAAGGGAGTTCATTGTGGATTTAATGGCAGATCCTGGTACACTTATTCCAGCTGATGTTGCTGGATCGCATGTAGAGTATGATGAATCCCCTTTTTCAGCCAGTCCACTTTCTAGAGATGTTGATTCCTCTCAGGCAGCCTCTTCAAGCAGTGGGGTTGGCAGTTCGTTAGAGGAAAATTCAGACTTTGGGACATCAGATCGGAAACCAAAGTCCCGAAATTTCAGTGCCACAAAGGAATATGATCCTCCCAATGTTGACAAGGGGCTATCACGTGATTTTGCTAGCAAACCAAATTATCCTGGCATGCACGTTAGATCACCTTCTTGGACTGAAGGTGTTAGTTCACCTGCAGTGCGCAGAATGAAAGTAAAGGATGTTTCACAATACATGATTGATGCTGCCAAAGAGAATCCACGCCTGGCTCAGAAGCTTCATGATGTGTTGCTTGAAAGCGGTGTAGTTGCACCCCCTAACTTGTTTACCGAGGCATACCCTGATCAAATAGATGTTATTGTTGAGTCTAAGCCACCAACTGAAGACAGGGATCAAAATAGAAAGGTGCCCGGTCTATGTGAAAGTGTAGATAAGAAAGATCCTCGTCCAGCTAACTTTTTGCCTCCTTTGCCTCAGCCCAGACTGCATCCTAAAGCAAGCCCTACACATGGCCAACAACAGCATCTTAAACCTCTGGAACTCAACCTCTCTCTTGATTCAAGAGAAGCAGTCGGACAACCTATAGCCTTACCATTTGAGGTAACTCCAGTGAAGTATGGGAGAAATGTACCTGTTGCTGCAGCAGCAGCAGCTGCTGCAGCTGTTGTTGCATCATCAATGGTAGTAGCTGCAGCAAAGAGTACTGATGCAAATCTTGAAATTCCTGTAGCAGCTGCTGCCACTGCCACTGCTGCTGCAGTGGTTGCAACAACTGCCGCAGTCAACAAGCAGTATGAGCAGGCTGAGGCTGATGCTGCTCTTTATGAGCAGCGTGGAAGTGGAGATAGGGAGCATGATGCTTATGGAGAAAATTCAGAGGGTGAACGAATATCAGACAGATCAGCAGGGAATGAAAGCACAAAATCCGATATTACCCTTGACGACGTTGCAGAATGCGAGATCCCATGGGAAGAAATCTCCTTGGGAGAGCGTATTGGACTTGGGTCTTACGGGGAGGTCTATCGTGGAGATTGGCATGGAACTGAGGTAGCTGTGAAGAGGTTTCTAGACCAGGATATTTCGGGTGAATCTCTTGAAGAATTCAAAAGTGAGGTACGAATTATGAAAAGGCTTCGGCATCCAAATGTTGTTCTCTTCATGGGAGCTGTGACACGTGCTCCCAATCTTTCAATTGTTACAGAATTTCTTCCCAGAGGTAGCTTGTACAGGTTAATTCACCGTCCCAACAATCAATTAGATGAACGAAAGCGTTTGAGAATGGCCCTCGATGCAGCTCGGGGAATGAATTATTTGCACAATTGCACACCTGTCATTGTACATCGCGATTTGAAGTCCCCAAATCTTCTTGTTGATAAAAATTGGGTTGTGAAGGTATGCGATTTTGGTTTATCAAAAATGAAGCATAGCACATTTCTTTCTTCAAGGTCAACAGCTGGAACGGCTGAGTGGATGGCTCCAGAAGTGTTGAGAAATGAACCTTCAGATGAAAAGTGTGACGTTTATAGTTACGGAGTTATTCTGTGGGAGCTTTCTACAATGCAACAACCATGGGGAGGAATGAACCCGATGCAAGTTGTTGGTGCTGTTGGCTTTCAGCATCGCCGTCTTGACATCCCTGACAATATGGATCCTGCCATTGCTGACATTATAAGGAAATGCTGGCAAACCTAA 2880 45.49 MKNLLKKFHIMSSGQSDDAAEGSTSSRGSKLIEFSSPDKLPSRSRPTHFNSEHKPFSGISGWLNSVTNRRSPSPPSSSNPTAGEIMEPSDSVSSRDAAMDASRHDSGSSNSRDPDIEEEYQIQLALEMSAREDPEAAQIEAVKQISLGSCDPDNTPAEVIAFRYWNYNSLSYDDKILDGFYDLYGVFTKSISERMPSLVDLQGAPMSDSVTWEAVLINKAADANLLKLEQTALEMAIKVRSESPISVNSYLVRKLAVLVSDHMGGPVGDPEKMLRKWRNLSYSLKATLGSMVLPLGSLTVGLARHRALLFKLLADGVDIPCRLVKGPEYTGSDDVAMNFVKIDDGREFIVDLMADPGTLIPADVAGSHVEYDESPFSASPLSRDVDSSQAASSSSGVGSSLEENSDFGTSDRKPKSRNFSATKEYDPPNVDKGLSRDFASKPNYPGMHVRSPSWTEGVSSPAVRRMKVKDVSQYMIDAAKENPRLAQKLHDVLLESGVVAPPNLFTEAYPDQIDVIVESKPPTEDRDQNRKVPGLCESVDKKDPRPANFLPPLPQPRLHPKASPTHGQQQHLKPLELNLSLDSREAVGQPIALPFEVTPVKYGRNVPVAAAAAAAAAVVASSMVVAAAKSTDANLEIPVAAAATATAAAVVATTAAVNKQYEQAEADAALYEQRGSGDREHDAYGENSEGERISDRSAGNESTKSDITLDDVAECEIPWEEISLGERIGLGSYGEVYRGDWHGTEVAVKRFLDQDISGESLEEFKSEVRIMKRLRHPNVVLFMGAVTRAPNLSIVTEFLPRGSLYRLIHRPNNQLDERKRLRMALDAARGMNYLHNCTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSKMKHSTFLSSRSTAGTAEWMAPEVLRNEPSDEKCDVYSYGVILWELSTMQQPWGGMNPMQVVGAVGFQHRRLDIPDNMDPAIADIIRKCWQT 959
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 72948055 72962228 - Tan0008082.2 Tan05g2201 753509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2201 959 Pfam Protein tyrosine and serine/threonine kinase 723 958 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g2201 959 MobiDBLite consensus disorder prediction 673 699 - -
Tan05g2201 959 MobiDBLite consensus disorder prediction 16 32 - -
Tan05g2201 959 MobiDBLite consensus disorder prediction 380 405 - -
Tan05g2201 959 FunFam PAS domain-containing protein tyrosine kinase family protein 800 959 - -
Tan05g2201 959 ProSitePatterns Protein kinases ATP-binding region signature. 728 749 IPR017441 GO:0005524(InterPro)
Tan05g2201 959 MobiDBLite consensus disorder prediction 373 457 - -
Tan05g2201 959 Gene3D Transferase(Phosphotransferase) domain 1 801 959 - -
Tan05g2201 959 MobiDBLite consensus disorder prediction 1 116 - -
Tan05g2201 959 SUPERFAMILY Protein kinase-like (PK-like) 705 958 IPR011009 -
Tan05g2201 959 MobiDBLite consensus disorder prediction 673 707 - -
Tan05g2201 959 Pfam Ethylene-responsive protein kinase Le-CTR1 157 360 - -
Tan05g2201 959 FunFam Serine/threonine-protein kinase isoform 1 713 800 - -
Tan05g2201 959 Gene3D Phosphorylase Kinase; domain 1 715 799 - -
Tan05g2201 959 SMART serkin_6 722 959 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2201 959 MobiDBLite consensus disorder prediction 97 116 - -
Tan05g2201 959 MobiDBLite consensus disorder prediction 519 544 - -
Tan05g2201 959 ProSitePatterns Serine/Threonine protein kinases active-site signature. 841 853 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g2201 959 CDD STKc_MAP3K-like 728 959 - -
Tan05g2201 959 ProSiteProfiles Protein kinase domain profile. 722 959 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2201 959 MobiDBLite consensus disorder prediction 519 570 - -
Tan05g2201 959 MobiDBLite consensus disorder prediction 51 88 - -
Tan05g2201 959 PANTHER SERINE-THREONINE PROTEIN KINASE 70 959 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Tan05g2201 959 Coils Coil 654 674 - -
Tan05g2201 959 MobiDBLite consensus disorder prediction 406 420 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2201 Tan-Chr5:72948055 Tan09g0553 Tan-Chr9:49097452 6.90E-157 dispersed
Tan05g2200 Tan-Chr5:72948055 Tan05g2201 Tan-Chr5:72948055 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67643 PF07714 PK_Tyr_Ser-Thr 7.70E-62 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2201 - - - 0.0