Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2202 ATGGATCGCTTCAATAAGGGTGAGAAGCAATCAGAATTTTTCACAGAGTATGGAGAAGCAAGCCGATACCAAATTCAGGAAGTTATTGGGAAAGGAAGCTACGGAGTTGTTGGTTCTGCAATTGACACCCAAACTGGTGAAAGAGTTGCTATCAAGAAAATTAATGATGTTTTTGAGCATGTGTCTGATGCCATACGCATCCTAAGAGAAATAAAGCTTCTTCGGATGCTTCATCATCCGAATATTGTAGAGATAAAACATATTATGCTTCCTCCCTCACAACGAGAATTCAAAGACATATATCTTGTTTTTGAGTTGATGAAGTCTGATCTTCACCAAGTGATTAAGGCAAATAATGGTCTTTCTCCCAAGCAGCACAAATTTTTCTTGTACCAGCTGCTTAGTGGCCTAAAATATATACATGCAGCAAATGTTCTTCATCGAGATTTGAAGCCAAAAAACATACTTGCTAATACTGACTGTAGACTGAAGATATGTGATTTTGGACTTGCTCGCGTATCTTTTAGTGATGCACCATCTACTATTTTCTGGACAGATTATGTTGCAACTCGTTGGTATCGTGCTCCCGAACTCTGTGGATCGTTTTTCTCGAGATATACTCCTGCTATAGATATATGGAGTATCGGATGCATATTTGCAGAAATGCTTACTGGAAAACCTTTGTTTCCTGGAAAAAATGTGGTTCACCAATTAGATCTAATTACCGATCTGTTTGGCACTCCTGATGCTGAATCCATAGCGAAGATTCGGAATGAGAAGGCAAGAAGGTATCTTGGAAACATGCGTAAAAAAACACCAGTTCCATTCTCACGAAAGTTTCCTAATGTTGACCCATTGGCACTTCGTTTACTGGAACGCCTCCTAGCATTTGATCCCAAATGTCGTCTAACTGCTGCAGAGGCACTTACTGATCCTTACTTCAATGATATGAAGAAAGCAGAACTTGGACCTTCTATTCAACCAATTTCAAAACTTGAGTTTGAGTTTGAGAGGAGGAGATTAACAAAAGATGATGTTAGAGAGTTAATTTATGCAGAGATTTTAGAGTATCATCCCCAAATGCGTCAGGAGTGTCTACGCGATGGAGATCAAACTACCTTTATGTATCCAAGTGGCGTTGATCGATTTAAGCTTCAGTTTGCGCATCTGGAAGAGAACTATCGTAAAGGTCAAAGAAGTACTCCACTTCAAAGGCAGAACGTTTCTTTACCTCGGGAGCGGGTTAGACTACCTGAGCCCAAGAACGCTGAGCATAACAATGATTATGGATGGGGGAAAGAGAAGAGTGGTCACCTCTTGAAAAGTGCGAGCATTAGTGCATCGAGGTGTGTTGGGGTAATACCGAAGGAGAAGTCTGAGGCGGAAGAAACGAGTTCTGAAGTGAAAAATGAAGCAGTCGATGGATTGACTCAAAAGATTGCTGTTCTTCAGACTTGA 1458 40.6 MDRFNKGEKQSEFFTEYGEASRYQIQEVIGKGSYGVVGSAIDTQTGERVAIKKINDVFEHVSDAIRILREIKLLRMLHHPNIVEIKHIMLPPSQREFKDIYLVFELMKSDLHQVIKANNGLSPKQHKFFLYQLLSGLKYIHAANVLHRDLKPKNILANTDCRLKICDFGLARVSFSDAPSTIFWTDYVATRWYRAPELCGSFFSRYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLITDLFGTPDAESIAKIRNEKARRYLGNMRKKTPVPFSRKFPNVDPLALRLLERLLAFDPKCRLTAAEALTDPYFNDMKKAELGPSIQPISKLEFEFERRRLTKDDVRELIYAEILEYHPQMRQECLRDGDQTTFMYPSGVDRFKLQFAHLEENYRKGQRSTPLQRQNVSLPRERVRLPEPKNAEHNNDYGWGKEKSGHLLKSASISASRCVGVIPKEKSEAEETSSEVKNEAVDGLTQKIAVLQT 485
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 72977610 72983625 + Tan0022645.1 Tan05g2202 753510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2202 485 ProSitePatterns MAP kinase signature. 58 161 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2202 485 SUPERFAMILY Protein kinase-like (PK-like) 19 317 IPR011009 -
Tan05g2202 485 ProSiteProfiles Protein kinase domain profile. 23 314 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2202 485 Gene3D Phosphorylase Kinase; domain 1 39 360 - -
Tan05g2202 485 ProSitePatterns Protein kinases ATP-binding region signature. 29 53 IPR017441 GO:0005524(InterPro)
Tan05g2202 485 Pfam Protein kinase domain 23 314 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2202 485 FunFam Mitogen-activated protein kinase 109 337 - -
Tan05g2202 485 CDD STKc_TDY_MAPK 22 359 - -
Tan05g2202 485 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 20 355 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Tan05g2202 485 SMART serkin_6 23 314 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2202 485 Gene3D Transferase(Phosphotransferase) domain 1 109 337 - -
Tan05g2202 485 FunFam Mitogen-activated protein kinase 11 116 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2202 Tan-Chr5:72977610 Tan05g2204 Tan-Chr5:72977610 3.00E-241 dispersed
Tan05g2202 Tan-Chr5:72977610 Tan05g2203 Tan-Chr5:72977610 8.10E-255 tandem
Tan05g2202 Tan-Chr5:72977610 Tan09g1847 Tan-Chr9:69813272 1.30E-47 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67644 PF00069 Pkinase 1.00E-68 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2202 - - - 0.0