Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2203 ATGGATCGCTTCAATAAGGGTGAGAAGCAATCAGAATTTTTCACAGAGTATGGAGAAGCAAGCCGATACCAAATTCAGGAAGTTATTGGGAAAGGAAGCTACGGAGTTGTTGGTTCTGCAATTGACACCCAAACTGGTGAAAGAGTTGCTATCAAGAAAATTAATGATGTTTTTGAGCATGTGTCTGATGCCATACGCATCCTAAGAGAAATAAAGCTTCTTCGGATGCTTCATCATCCGAATATTGTAGAGATAAAACATATTATGCTTCCTCCCTCACAACGAGAATTCAAAGACATATATCTTGTTTTTGAGTTGATGAAGTCTGATCTTCACCAAGTGATTAAGGCAAATAATGGTCTTTCTCCCAAGCAGCACAAATTTTTCTTGTACCAGCTGCTTAGTGGCCTAAAATATATACATGCAGCAAATGTTCTTCATCGAGATTTGAAGCCAAAAAACATACTTGCTAATACTGACTGTAGACTGAAGATATGTGATTTTGGACTTGCTCGCGTATCTTTTAGTGATGCACCATCTACTATTTTCTGGACAGATTATGTTGCAACTCGTTGGTATCGTGCTCCCGAACTCTGTGGATCGTTTTTCTCGAGATATACTCCTGCTATAGATATATGGAGTATCGGATGCATATTTGCAGAAATGCTTACTGGAAAACCTTTGTTTCCTGGAAAAAATGTGGTTCACCAATTAGATCTAATTACCGATCTGTTTGGCACTCCTGATGCTGAATCCATAGCGAAGATTCGGAATGAGAAGGCAAGAAGGTATCTTGGAAACATGCGTAAAAAAACACCAGTTCCATTCTCACGAAAGTTTCCTAATGTTGACCCATTGGCACTTCGTTTACTGGAACGCCTCCTAGCATTTGATCCCAAATGTCGTCTAACTGCTGCAGAGGCACTTACTGATCCTTACTTCAATGATATGAAGAAAGCAGAACTTGGACCTTCTATTCAACCAATTTCAAAACTTGAGTTTGAGTTTGAGAGGAGGAGATTAACAAAAGATGATGTTAGAGAGTTAATTTATGCAGAGATTTTAGAGTATCATCCCCAAATGCGTCAGGAGTGTCTACGCGATGGAGATCAAACTACCTTTATGTATCCAAGTGGCGTTGATCGATTTAAGCTTCAGTTTGCGCATCTGGAAGAGAACTATCGTAAAGGTCAAAGAAGTACTCCACTTCAAAGGCAGAACGTTTCTTTACCTCGGGAGCGGGTTAGACTACCTGAGCCCAAGAACGCTGAGCATAACAATGATTATGGATGGTAG 1296 39.97 MDRFNKGEKQSEFFTEYGEASRYQIQEVIGKGSYGVVGSAIDTQTGERVAIKKINDVFEHVSDAIRILREIKLLRMLHHPNIVEIKHIMLPPSQREFKDIYLVFELMKSDLHQVIKANNGLSPKQHKFFLYQLLSGLKYIHAANVLHRDLKPKNILANTDCRLKICDFGLARVSFSDAPSTIFWTDYVATRWYRAPELCGSFFSRYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLITDLFGTPDAESIAKIRNEKARRYLGNMRKKTPVPFSRKFPNVDPLALRLLERLLAFDPKCRLTAAEALTDPYFNDMKKAELGPSIQPISKLEFEFERRRLTKDDVRELIYAEILEYHPQMRQECLRDGDQTTFMYPSGVDRFKLQFAHLEENYRKGQRSTPLQRQNVSLPRERVRLPEPKNAEHNNDYGW 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 72977610 72983625 + Tan0022645.2 Tan05g2203 753511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2203 431 ProSitePatterns MAP kinase signature. 58 161 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2203 431 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 20 355 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Tan05g2203 431 Gene3D Phosphorylase Kinase; domain 1 39 360 - -
Tan05g2203 431 ProSiteProfiles Protein kinase domain profile. 23 314 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2203 431 MobiDBLite consensus disorder prediction 396 431 - -
Tan05g2203 431 ProSitePatterns Protein kinases ATP-binding region signature. 29 53 IPR017441 GO:0005524(InterPro)
Tan05g2203 431 FunFam Mitogen-activated protein kinase 109 337 - -
Tan05g2203 431 CDD STKc_TDY_MAPK 22 359 - -
Tan05g2203 431 Gene3D Transferase(Phosphotransferase) domain 1 109 337 - -
Tan05g2203 431 SMART serkin_6 23 314 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2203 431 SUPERFAMILY Protein kinase-like (PK-like) 19 317 IPR011009 -
Tan05g2203 431 Pfam Protein kinase domain 23 314 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2203 431 FunFam Mitogen-activated protein kinase 11 116 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2203 Tan-Chr5:72977610 Tan09g1832 Tan-Chr9:69723447 1.50E-204 dispersed
Tan05g2202 Tan-Chr5:72977610 Tan05g2203 Tan-Chr5:72977610 8.10E-255 tandem
Tan05g2203 Tan-Chr5:72977610 Tan05g2204 Tan-Chr5:72977610 7.50E-212 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67645 PF00069 Pkinase 7.20E-69 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2203 - - - 0.0