Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2204 ATGCTTCATCATCCGAATATTGTAGAGATAAAACATATTATGCTTCCTCCCTCACAACGAGAATTCAAAGACATATATCTTGTTTTTGAGTTGATGAAGTCTGATCTTCACCAAGTGATTAAGGCAAATAATGGTCTTTCTCCCAAGCAGCACAAATTTTTCTTGTACCAGCTGCTTAGTGGCCTAAAATATATACATGCAGCAAATGTTCTTCATCGAGATTTGAAGCCAAAAAACATACTTGCTAATACTGACTGTAGACTGAAGATATGTGATTTTGGACTTGCTCGCGTATCTTTTAGTGATGCACCATCTACTATTTTCTGGACAGATTATGTTGCAACTCGTTGGTATCGTGCTCCCGAACTCTGTGGATCGTTTTTCTCGAGATATACTCCTGCTATAGATATATGGAGTATCGGATGCATATTTGCAGAAATGCTTACTGGAAAACCTTTGTTTCCTGGAAAAAATGTGGTTCACCAATTAGATCTAATTACCGATCTGTTTGGCACTCCTGATGCTGAATCCATAGCGAAGATTCGGAATGAGAAGGCAAGAAGGTATCTTGGAAACATGCGTAAAAAAACACCAGTTCCATTCTCACGAAAGTTTCCTAATGTTGACCCATTGGCACTTCGTTTACTGGAACGCCTCCTAGCATTTGATCCCAAATGTCGTCTAACTGCTGCAGAGGCACTTACTGATCCTTACTTCAATGATATGAAGAAAGCAGAACTTGGACCTTCTATTCAACCAATTTCAAAACTTGAGTTTGAGTTTGAGAGGAGGAGATTAACAAAAGATGATGTTAGAGAGTTAATTTATGCAGAGATTTTAGAGTATCATCCCCAAATGCGTCAGGAGTGTCTACGCGATGGAGATCAAACTACCTTTATGTATCCAAGTGGCGTTGATCGATTTAAGCTTCAGTTTGCGCATCTGGAAGAGAACTATCGTAAAGGTCAAAGAAGTACTCCACTTCAAAGGCAGAACGTTTCTTTACCTCGGGAGCGGGTTAGACTACCTGAGCCCAAGAACGCTGAGCATAACAATGATTATGGATGGGGGAAAGAGAAGAGTGGTCACCTCTTGAAAAGTGCGAGCATTAGTGCATCGAGGTGTGTTGGGGTAATACCGAAGGAGAAGTCTGAGGCGGAAGAAACGAGTTCTGAAGTGAAAAATGAAGCAGTCGATGGATTGACTCAAAAGATTGCTGTTCTTCAGACTTGA 1233 40.63 MLHHPNIVEIKHIMLPPSQREFKDIYLVFELMKSDLHQVIKANNGLSPKQHKFFLYQLLSGLKYIHAANVLHRDLKPKNILANTDCRLKICDFGLARVSFSDAPSTIFWTDYVATRWYRAPELCGSFFSRYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLITDLFGTPDAESIAKIRNEKARRYLGNMRKKTPVPFSRKFPNVDPLALRLLERLLAFDPKCRLTAAEALTDPYFNDMKKAELGPSIQPISKLEFEFERRRLTKDDVRELIYAEILEYHPQMRQECLRDGDQTTFMYPSGVDRFKLQFAHLEENYRKGQRSTPLQRQNVSLPRERVRLPEPKNAEHNNDYGWGKEKSGHLLKSASISASRCVGVIPKEKSEAEETSSEVKNEAVDGLTQKIAVLQT 410
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 72977610 72983625 + Tan0022645.3 Tan05g2204 753512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2204 410 ProSiteProfiles Protein kinase domain profile. 1 239 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2204 410 Gene3D Transferase(Phosphotransferase) domain 1 34 262 - -
Tan05g2204 410 Gene3D Phosphorylase Kinase; domain 1 1 285 - -
Tan05g2204 410 SMART serkin_6 1 239 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2204 410 SUPERFAMILY Protein kinase-like (PK-like) 2 242 IPR011009 -
Tan05g2204 410 Pfam Protein kinase domain 2 239 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2204 410 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 2 280 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Tan05g2204 410 FunFam Mitogen-activated protein kinase 34 262 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2202 Tan-Chr5:72977610 Tan05g2204 Tan-Chr5:72977610 3.00E-241 dispersed
Tan05g2204 Tan-Chr5:72977610 Tan09g1832 Tan-Chr9:69723447 1.50E-177 dispersed
Tan05g2203 Tan-Chr5:72977610 Tan05g2204 Tan-Chr5:72977610 7.50E-212 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67646 PF00069 Pkinase 4.10E-53 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2204 - - - 0.0