Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2236 ATGAAAACTTCCCTCCCTCTCTTCTTCTTCTTCTTCTTCTTCTTATTCTTCACAATCGTGTGGCTTGATGTTCAGCTATGTTTCGGGGATGACGCCCACGAGGAATTTAAAGCTTGCGGTGTGGTTTACAACTGCGGAGAATTGGTTAATATCCGCTATCCCTTTTGGGGAAATGAGCGACAGGAATTTTGCGGGCGGCGTCAATTCAAGCTCGACTGCAAACACAACAAAACCACCACGATTGCAATCAATTCAATAGAATATAACGTTCTCAACATCACCCAATTGGATCATATAATGACCATAGCAAGATCAGACCTCTTGGAAGACTACTGCCCTAAAAATCAAATCCAAACGGCGACGTTGGATCATGATTTCTTCACGTATTCTTCCAACGATCGGAACATATCTATCTGGTACGATTGCCCGCCGGAACTCGGAATTCCGAGGGATTACAGATTTTGGTGCGGATGGGAAGGGGAAATCAGTGGGAGAGCGAATTATTTTTTGGAACCGGAGATGATGAATTGGAGCAAAATTATCAGAGATTGTACAATAAACATCGAAGTGACGGTGACGGTGGAGGGGTTGGAAGAAGGAAAGAAGACTAGAACGGCGATAGTGGAGACGGCTCTGGGACACGGCTTCGAAGTGGATTATGGGGATTGGCACATGGTGGCGTGTGGAGGATGCACGGAATCTGGCGGCAAATGTGGATCCAACGCCACCAGTGAGTTTTATTGCATCTGTGGAAATGGAGATATTCATCCTTTCGTCTGCAAACATTCAGATAAAAATGATAACTGGAGGAAGCCCGTCATAGGTGTTTGCTCTGGTATTGGAGGCGTATTGATAATGAGTGTAGTCTTTTTCATCTGGTTTCGTTTGCACAAAAAGAAGCTTGCTCGTGCTTATGCTCCTTCCTCCTTTCTCCTACGAAACAATTCTAGTGAACCTCCAGCGAAGGAACTTGAGAACGGAGAAAATTACATGGGAGCACCTCTGTTCTCTTATGAAGAACTTGAAAAGGCCACTGACAGATTTAATCCGGCCAAAGAACTTGGAGATGGTGGCTTTGGCACTGTCTACTATGGCAAACTCCAAGATGGGCGTGAGGTCGCAGTTAAACGAATGTTCGAAAATAACTACAGACAAGTTGAGCACTTCATGAATGAAGTTGAGATCCTTACTCGTTTGCGCCATCCACATCTAGTCACCCTTTATGGATGCACCTCTCGACGCTGTCGTGAACTCTTGCTGGTTTATGAATTCATTCCGAACGGTACCGTTGCCGATCATCTTCATGGCACTCGAGCAAAACCTGGTGAGCTTGCATGGGATACAAGGCTGAAGATTGCCATAGAGACTGCAAGTGCTCTAGCTTTTCTCCATGCTTCCGAGACCATCCACCGTGATGTTAAAACCACCAACATTCTCCTTGACAGCAACTTCGGTGTTAAAGTCGCCGATTTCGGACTATCTCGCCTTTTTCCTACGCAAGCCACACATATTTCAACTGCTCCACAAGGAACTCCTGGTTACGTCGATCCAGAGTATCATGAATGTTATCAACTTACAAATAAAAGTGATGTCTTTAGCTTTGGAGTCGTCTTGGTTGAGCTTATATCTTCAAAGCCAGCCGTTGATATCACAAGGCACAGACATGAGATTAACTTGTGGACAATGGCGATCAACAAGATTCGAAACGACGAATTACACGACTTTGTAGATCCATCTCTTGGATTTGAAACAGAGGAAAAGGTTAAAGAAATGATATGTGCAGTTGCAGAGTTGGCATTTCGATGCTTACAAAGTGTGAAGGACACAAGGCCGTCTATGTCGGAGGCATTGGAAATTCTAAAGAACATAGAGAGTCAGAGTAGTGGGAAAGGAAACACAGAAGGAATAGACATTATTTCAGGAGAAGATGATGTTCTCCTGAAAGGTGGTTTAGTGCCAGAGTCTCCAGATTCTGTTGTCGTACCTTGGATGAGCAAATCTTCAACACCAAATGTTAGTGGCTAA 2025 44.44 MKTSLPLFFFFFFFLFFTIVWLDVQLCFGDDAHEEFKACGVVYNCGELVNIRYPFWGNERQEFCGRRQFKLDCKHNKTTTIAINSIEYNVLNITQLDHIMTIARSDLLEDYCPKNQIQTATLDHDFFTYSSNDRNISIWYDCPPELGIPRDYRFWCGWEGEISGRANYFLEPEMMNWSKIIRDCTINIEVTVTVEGLEEGKKTRTAIVETALGHGFEVDYGDWHMVACGGCTESGGKCGSNATSEFYCICGNGDIHPFVCKHSDKNDNWRKPVIGVCSGIGGVLIMSVVFFIWFRLHKKKLARAYAPSSFLLRNNSSEPPAKELENGENYMGAPLFSYEELEKATDRFNPAKELGDGGFGTVYYGKLQDGREVAVKRMFENNYRQVEHFMNEVEILTRLRHPHLVTLYGCTSRRCRELLLVYEFIPNGTVADHLHGTRAKPGELAWDTRLKIAIETASALAFLHASETIHRDVKTTNILLDSNFGVKVADFGLSRLFPTQATHISTAPQGTPGYVDPEYHECYQLTNKSDVFSFGVVLVELISSKPAVDITRHRHEINLWTMAINKIRNDELHDFVDPSLGFETEEKVKEMICAVAELAFRCLQSVKDTRPSMSEALEILKNIESQSSGKGNTEGIDIISGEDDVLLKGGLVPESPDSVVVPWMSKSSTPNVSG 674
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 73305477 73312270 + Tan0014882.1 Tan05g2236 753544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2236 674 Gene3D Phosphorylase Kinase; domain 1 321 424 - -
Tan05g2236 674 FunFam Wall-associated receptor kinase-like 20 425 633 - -
Tan05g2236 674 Gene3D Transferase(Phosphotransferase) domain 1 425 640 - -
Tan05g2236 674 SUPERFAMILY Protein kinase-like (PK-like) 330 623 IPR011009 -
Tan05g2236 674 Pfam Protein tyrosine and serine/threonine kinase 351 618 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g2236 674 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524(InterPro)
Tan05g2236 674 Pfam Wall-associated receptor kinase galacturonan-binding 44 104 IPR025287 GO:0030247(InterPro)
Tan05g2236 674 ProSiteProfiles Protein kinase domain profile. 348 623 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2236 674 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 14 669 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
Tan05g2236 674 SMART serkin_6 348 619 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2236 674 Pfam Wall-associated receptor kinase C-terminal 172 252 IPR032872 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2236 Tan-Chr5:73305477 Tan05g2238 Tan-Chr5:73307977 4.90E-266 dispersed
Tan05g2236 Tan-Chr5:73305477 Tan05g2237 Tan-Chr5:73305477 0.00E+00 tandem
Tan04g1137 Tan-Chr4:10612012 Tan05g2236 Tan-Chr5:73305477 3.70E-74 transposed
Tan11g0102 Tan-Chr11:1099104 Tan05g2236 Tan-Chr5:73305477 9.30E-151 transposed
Tan05g2236 Tan-Chr5:73305477 Tan09g1879 Tan-Chr9:70010256 5.60E-145 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67647 PF00069 Pkinase 9.50E-46 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2236 - - - 0.0