Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2237 ATGAAAACTTCCCTCCCTCTCTTCTTCTTCTTCTTCTTCTTCTTATTCTTCACAATCGTGTGGCTTGATGTTCAGCTATGTTTCGGGGATGACGCCCACGAGGAATTTAAAGCTTGCGGTGTGGTTTACAACTGCGGAGAATTGGTTAATATCCGCTATCCCTTTTGGGGAAATGAGCGACAGGAATTTTGCGGGCGGCGTCAATTCAAGCTCGACTGCAAACACAACAAAACCACCACGATTGCAATCAATTCAATAGAATATAACGTTCTCAACATCACCCAATTGGATCATATAATGACCATAGCAAGATCAGACCTCTTGGAAGACTACTGCCCTAAAAATCAAATCCAAACGGCGACGTTGGATCATGATTTCTTCACGTATTCTTCCAACGATCGGAACATATCTATCTGGTACGATTGCCCGCCGGAACTCGGAATTCCGAGGGATTACAGATTTTGGTGCGGATGGGAAGGGGAAATCAGTGGGAGAGCGAATTATTTTTTGGAACCGGAGATGATGAATTGGAGCAAAATTATCAGAGATTGTACAATAAACATCGAAGTGACGGTGACGGTGGAGGGGTTGGAAGAAGGAAAGAAGACTAGAACGGCGATAGTGGAGACGGCTCTGGGACACGGCTTCGAAGTGGATTATGGGGATTGGCACATGGTGGCGTGTGGAGGATGCACGGAATCTGGCGGCAAATGTGGATCCAACGCCACCAGTGAGTTTTATTGCATCTGTGGAAATGGAGATATTCATCCTTTCGTCTGCAAACATTCAGGTGTTTGCTCTGGTATTGGAGGCGTATTGATAATGAGTGTAGTCTTTTTCATCTGGTTTCGTTTGCACAAAAAGAAGCTTGCTCGTGCTTATGCTCCTTCCTCCTTTCTCCTACGAAACAATTCTAGTGAACCTCCAGCGAAGGAACTTGAGAACGGAGAAAATTACATGGGAGCACCTCTGTTCTCTTATGAAGAACTTGAAAAGGCCACTGACAGATTTAATCCGGCCAAAGAACTTGGAGATGGTGGCTTTGGCACTGTCTACTATGGCAAACTCCAAGATGGGCGTGAGGTCGCAGTTAAACGAATGTTCGAAAATAACTACAGACAAGTTGAGCACTTCATGAATGAAGTTGAGATCCTTACTCGTTTGCGCCATCCACATCTAGTCACCCTTTATGGATGCACCTCTCGACGCTGTCGTGAACTCTTGCTGGTTTATGAATTCATTCCGAACGGTACCGTTGCCGATCATCTTCATGGCACTCGAGCAAAACCTGGTGAGCTTGCATGGGATACAAGGCTGAAGATTGCCATAGAGACTGCAAGTGCTCTAGCTTTTCTCCATGCTTCCGAGACCATCCACCGTGATGTTAAAACCACCAACATTCTCCTTGACAGCAACTTCGGTGTTAAAGTCGCCGATTTCGGACTATCTCGCCTTTTTCCTACGCAAGCCACACATATTTCAACTGCTCCACAAGGAACTCCTGGTTACGTCGATCCAGAGTATCATGAATGTTATCAACTTACAAATAAAAGTGATGTCTTTAGCTTTGGAGTCGTCTTGGTTGAGCTTATATCTTCAAAGCCAGCCGTTGATATCACAAGGCACAGACATGAGATTAACTTGTGGACAATGGCGATCAACAAGATTCGAAACGACGAATTACACGACTTTGTAGATCCATCTCTTGGATTTGAAACAGAGGAAAAGGTTAAAGAAATGATATGTGCAGTTGCAGAGTTGGCATTTCGATGCTTACAAAGTGTGAAGGACACAAGGCCGTCTATGTCGGAGGCATTGGAAATTCTAAAGAACATAGAGAGTCAGAGTAGTGGGAAAGGAAACACAGAAGGAATAGACATTATTTCAGGAGAAGATGATGTTCTCCTGAAAGGTGGTTTAGTGCCAGAGTCTCCAGATTCTGTTGTCGTACCTTGGATGAGCAAATCTTCAACACCAAATGTTAGTGGCTAA 1992 44.53 MKTSLPLFFFFFFFLFFTIVWLDVQLCFGDDAHEEFKACGVVYNCGELVNIRYPFWGNERQEFCGRRQFKLDCKHNKTTTIAINSIEYNVLNITQLDHIMTIARSDLLEDYCPKNQIQTATLDHDFFTYSSNDRNISIWYDCPPELGIPRDYRFWCGWEGEISGRANYFLEPEMMNWSKIIRDCTINIEVTVTVEGLEEGKKTRTAIVETALGHGFEVDYGDWHMVACGGCTESGGKCGSNATSEFYCICGNGDIHPFVCKHSGVCSGIGGVLIMSVVFFIWFRLHKKKLARAYAPSSFLLRNNSSEPPAKELENGENYMGAPLFSYEELEKATDRFNPAKELGDGGFGTVYYGKLQDGREVAVKRMFENNYRQVEHFMNEVEILTRLRHPHLVTLYGCTSRRCRELLLVYEFIPNGTVADHLHGTRAKPGELAWDTRLKIAIETASALAFLHASETIHRDVKTTNILLDSNFGVKVADFGLSRLFPTQATHISTAPQGTPGYVDPEYHECYQLTNKSDVFSFGVVLVELISSKPAVDITRHRHEINLWTMAINKIRNDELHDFVDPSLGFETEEKVKEMICAVAELAFRCLQSVKDTRPSMSEALEILKNIESQSSGKGNTEGIDIISGEDDVLLKGGLVPESPDSVVVPWMSKSSTPNVSG 663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 73305477 73312270 + Tan0014882.2 Tan05g2237 753545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2237 663 ProSiteProfiles Protein kinase domain profile. 337 612 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2237 663 Pfam Wall-associated receptor kinase galacturonan-binding 44 104 IPR025287 GO:0030247(InterPro)
Tan05g2237 663 Pfam Protein tyrosine and serine/threonine kinase 340 607 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g2237 663 FunFam Wall-associated receptor kinase-like 20 414 622 - -
Tan05g2237 663 Gene3D Transferase(Phosphotransferase) domain 1 414 629 - -
Tan05g2237 663 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524(InterPro)
Tan05g2237 663 SMART serkin_6 337 608 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2237 663 Pfam Wall-associated receptor kinase C-terminal 172 252 IPR032872 -
Tan05g2237 663 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 14 658 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
Tan05g2237 663 Gene3D Phosphorylase Kinase; domain 1 310 413 - -
Tan05g2237 663 SUPERFAMILY Protein kinase-like (PK-like) 319 612 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2237 Tan-Chr5:73305477 Tan05g2243 Tan-Chr5:73346163 2.40E-249 dispersed
Tan05g2236 Tan-Chr5:73305477 Tan05g2237 Tan-Chr5:73305477 0.00E+00 tandem
Tan05g2237 Tan-Chr5:73305477 Tan05g2238 Tan-Chr5:73307977 6.90E-257 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67648 PF00069 Pkinase 9.20E-46 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2237 - - - 0.0