Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2241 ATGAAAACGTTGGTAAAAGTAAAAGACGCCATGATCAGCAATATGTTGCTGATCGCGTTTCATGTCTGGCTCTGTTTCAGCACATTAGAGGTCGAGGTTGACTTATTTAAAGCTTGCGAGGTCAGTTACAATTGCGGAGAATTGGTTAACATCTCGTATCCGTTTTGGGGGAATGAGAGGCAGGGGTTTTGTGGGATGAGAGGATTGGAGCTCAAGTGCAACGACGACGGAAGGACAACAATTGAAATCAACTCGTTAGAATATTACGTTCTGAACATCAGCCAATGGGATCCCAATCGAGTAAAGATGAGAATCGCAAGATCGGACCTGTTCGATGATTTATGCCCTAAAAATATAAATAAAATCGAAACGGCGACGTTGGATTACAGTGGGTTCAGTTATACTGAGAACGATCGACATATCTCGATCTGGTACAATTGCCCGGCGGAAGAGGGAATTCCGGAGGAGTTCAGATTTGGGTGCAACAGCAACAACAACAATACTGGGAGTGGGAGATTAATGAATTATGCTTTGGAAGCGGAGGCCATGTATTTCAGCAAAAAATTGAGCGGCTGCAAATACAAAATCAACGCCACAGTCACGACGAAGGGGTGGGAAGAAGGAGGAGGAAATAACCGAACCGCGCTGCTGGAGACGGCTCTCAGACAAGGGTTCGAAGTTGGATACTTATCGGATCTCTATGGGTGCGAGCAGTGCAAGGAAAGTGGCGGCACGTGTAGAGGAGACGCCGCCCAAAGTGGCGGCGCGTGGGGAGGAAACGCGACCTGCATTTGTAGAAATGGAGATATACATCCCTTAGGCTTACAATGCGTAGCTTCTCTTCCTCCTCGTGCTTCAGTTTCCCACACCATGACAGGACAACCAAATCATATGAGGAAGAAGGCCGTCATAGGTGCAAGTGGTTCGGGAAGTATCATTCTGATAATCTCCATTATCATCATCATCTCCATCTACTACAAGAGAAAAGGCATCTCAAACAAAGACACAATTGAGAAAATCATCAGGAGATATTCTACACAAACACCAAAGCGATATAGTTACTCAAAGATAAAGAAAATCACAAACTCCTTCAACAACAAACTTGGCCGAGGAGGATTTAGCACTGTCTACAAAGGAAAGTTGCCCGATGGGCGCGATGTGGCTGTGAAAGTACTTTTGAATGAATCCAAAGACGAACATGGGCAAGATTTTATGAATGAGGTTATTAGCATCACCCAAACATCACATGTAAATATAGCCACACTCTTGGGTTTCTGCTACGAAGGGAACAAAAGAGCTTTGATTTATGAGTATATGCCTAAAGGATCATTAGATAAGTATATGATGAGAAACGATGATGTTGGTGAGTTGGATTGGAACACACTCTATAACATCGTTATCGGTGTGGCACGAGGTTTAGAGTACTTGCATCTTGGTTGCAACACAAGAATTTTGCATTTTGATATCAAACCACACAACATTCTTTTGGATAATGAGTTTTGTCCCAAGATCTCAGACTTTGGGCTTGCCAAGCAATGCAATGTGAAAGAAACTCACGTGTCGATGACCGGCATGAAAGGGACGGTAGGCTTCATGGCACCAGAAGTAATATTTAGGAGCTATGGTAAGGTTTCATACAAGTCTGATGTTTATAGCTATGGAATGTTGGTTCTTGAAATGGTGGGAGAAAGAAAGAATCCCAACGAAGGAGTCAGCAGTGAAGAGTACTTTCCTGATTGGATATATAAGGATCTTACACGATCTGAAACAAATGGAGGTTGTTGTTGGAGCAACAGCAACAGCAACACCGAGGAGGAAGAAGAAAAGGCAAGAAAAATGATCATTGTGGGGTTGCATTGTATTCAAACATTGCCGAATGAGAGGCCATCGATGAGTGATGTGGTTGCCATGTTGGAAGCTAGTGTTGATGTCTTACAGATTCCACCAAAACCCAACTTGTTCGGACCTCTTACGCTTGAGATGCCCCAATTACCTTCTTCTTTTTCTTCTTCTTCATCCACCTGA 2025 43.56 MKTLVKVKDAMISNMLLIAFHVWLCFSTLEVEVDLFKACEVSYNCGELVNISYPFWGNERQGFCGMRGLELKCNDDGRTTIEINSLEYYVLNISQWDPNRVKMRIARSDLFDDLCPKNINKIETATLDYSGFSYTENDRHISIWYNCPAEEGIPEEFRFGCNSNNNNTGSGRLMNYALEAEAMYFSKKLSGCKYKINATVTTKGWEEGGGNNRTALLETALRQGFEVGYLSDLYGCEQCKESGGTCRGDAAQSGGAWGGNATCICRNGDIHPLGLQCVASLPPRASVSHTMTGQPNHMRKKAVIGASGSGSIILIISIIIIISIYYKRKGISNKDTIEKIIRRYSTQTPKRYSYSKIKKITNSFNNKLGRGGFSTVYKGKLPDGRDVAVKVLLNESKDEHGQDFMNEVISITQTSHVNIATLLGFCYEGNKRALIYEYMPKGSLDKYMMRNDDVGELDWNTLYNIVIGVARGLEYLHLGCNTRILHFDIKPHNILLDNEFCPKISDFGLAKQCNVKETHVSMTGMKGTVGFMAPEVIFRSYGKVSYKSDVYSYGMLVLEMVGERKNPNEGVSSEEYFPDWIYKDLTRSETNGGCCWSNSNSNTEEEEEKARKMIIVGLHCIQTLPNERPSMSDVVAMLEASVDVLQIPPKPNLFGPLTLEMPQLPSSFSSSSST 674
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 73336661 73339851 + Tan0006579.1 Tan05g2241 753549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2241 674 Pfam Wall-associated receptor kinase galacturonan-binding 39 95 IPR025287 GO:0030247(InterPro)
Tan05g2241 674 FunFam serine/threonine-protein kinase PBS1-like 331 438 - -
Tan05g2241 674 Pfam Protein tyrosine and serine/threonine kinase 364 637 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g2241 674 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524(InterPro)
Tan05g2241 674 Gene3D Transferase(Phosphotransferase) domain 1 439 646 - -
Tan05g2241 674 SUPERFAMILY Protein kinase-like (PK-like) 339 639 IPR011009 -
Tan05g2241 674 ProSiteProfiles Protein kinase domain profile. 362 642 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2241 674 FunFam PR5-like receptor kinase 439 650 - -
Tan05g2241 674 Gene3D Phosphorylase Kinase; domain 1 335 438 - -
Tan05g2241 674 PANTHER RUST RESISTANCE KINASE LR10-RELATED 301 653 IPR045874 GO:0004672(InterPro)
Tan05g2241 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 484 496 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g2241 674 Pfam Wall-associated receptor kinase C-terminal 161 267 IPR032872 -
Tan05g2241 674 SMART serkin_6 362 638 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2239 Tan-Chr5:73318519 Tan05g2241 Tan-Chr5:73336661 3.20E-211 dispersed
Tan05g2241 Tan-Chr5:73336661 Tan05g2244 Tan-Chr5:73349212 1.00E-199 dispersed
Tan05g2240 Tan-Chr5:73321544 Tan05g2241 Tan-Chr5:73336661 6.80E-252 tandem
Tan05g2241 Tan-Chr5:73336661 Tan05g2242 Tan-Chr5:73341188 3.10E-188 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67652 PF07714 PK_Tyr_Ser-Thr 6.30E-49 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2241 - - - 0.0