Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2242 ATGACCATAGCAAGATCAGACCTCTTGGAAGACTACTGCCCTAAAAATCAAATCCAAACGGCGACGTTGGATCATGATTTCTTCACGTATTCTTCCAACGATCGGAACATATCTATCTGGTACGATTGCCCGCCGGAACTCGGAATTCCGAGGGATTACAGATTTTGGTGCGGATGGGAAGGGGAAATCAGTGGGAGAGCGAATTATTTTTTGGAACCGGAGATGATGAATTGGAGCAAAATTATCAGAGATTGTACAATAAACATCGAAGTGACGGTGACGGTGGAGGGGTTGGAAGAAGGAAAGAAGACCAGAACGGCGGTAGTGGAGACGGCTCTGGGACACGGCTTCGAAGTGGATTACGGGGATTGGCACATGGTGGCGTGTGGAGGATGCACGGAATCTGGCGGCAAATGTGGATCCAACGCCACCAGTGAGTTTTATTGCATCTGTGGAAATGGAGATATTCATCCTTACGTCTGTGGAGCTCCGATTGCAATTTCTTCAGGGAGCATCATTCTGATCATCTTGGTCCTCGTCTTCATCTACAAAACAAGAAGACAGATCTCAAACAAAGACAGAATTGAAGAAATCATTTTGGCATATTCTGTACAAACACCCAAGCGATACAGTTACTCAAAATTGAAGAAAATCACGAATTCCTTCAAGAACAAGCTTGGCCAAGGAGGATTTAGCATAGTTTACAAAGGAAAGCTACAGGATGGTCGTGATGTGGCCGTAAAACTTATGAATGAGACAAAAGTCAATGGACAAGATTTTATGAATGAAGTTGTAAGCATCACAAGAACTTCACATATAAACATAGCAACCCTCTTGGGTTTCTGCTATGAGCGAAATAAAAGAGCTTTGATTTATGAGTATATGCCAAAAGGGTCACTAGATAAGTACATAATGCACAGAGGGTTACACAAAAATGATGTGAAATTGGATTGGAGCACACTTTACAACATCATTGCCGGCGTGGCACGAGGCTTAGAGTACTTGCATCGCGGTTGCAACACAAGGATTTTGCATTTTGACATCAAACCACACAACATTCTCTTGGACAATGATTTCTGCCCCAAAATTTCAGATTTTGGGATTGCCAAGCAATGCAGGGCCAAAGAGAGTCATGTGTCGATGACAGGAGTGAAGGGAACAGTAGGATTCATAGCGCCTGAAGTAATATTTAGAAATCTTGGGAAGGTTTCTCACAAGTCTGACGTTTATAGTTATGGAATGTTGGTTCTTGAAATGGTGGGGGAACGAAAGAGTCCTAATGCAATGGGGCAGAGCAGTAGCGAGTACTTTCCCGATTGGATATATAAAGATCTTACACAAATTAGTGAAATAGATGGGGGCTGTTGGTGGGGCAACACTAAGGAGGAAGAAGAAAAGGCAAGAAAAATGATAATTGTTGGGTTGCATTGTATTCAGACATTGCCCGACGAGAGGCCATCGATGACGGATGTGGTTGCGATGTTGGAAGGCAGTGTTGATGGCTTACAAATTCCACCAAAACCCTACTTGTTTGGACCTCCTGCGACTGATTTACTCCAAGCTGCTGCTTCTGCTTCTTCTTCTTCGACCTCGTACTAA 1599 43.53 MTIARSDLLEDYCPKNQIQTATLDHDFFTYSSNDRNISIWYDCPPELGIPRDYRFWCGWEGEISGRANYFLEPEMMNWSKIIRDCTINIEVTVTVEGLEEGKKTRTAVVETALGHGFEVDYGDWHMVACGGCTESGGKCGSNATSEFYCICGNGDIHPYVCGAPIAISSGSIILIILVLVFIYKTRRQISNKDRIEEIILAYSVQTPKRYSYSKLKKITNSFKNKLGQGGFSIVYKGKLQDGRDVAVKLMNETKVNGQDFMNEVVSITRTSHINIATLLGFCYERNKRALIYEYMPKGSLDKYIMHRGLHKNDVKLDWSTLYNIIAGVARGLEYLHRGCNTRILHFDIKPHNILLDNDFCPKISDFGIAKQCRAKESHVSMTGVKGTVGFIAPEVIFRNLGKVSHKSDVYSYGMLVLEMVGERKSPNAMGQSSSEYFPDWIYKDLTQISEIDGGCWWGNTKEEEEKARKMIIVGLHCIQTLPDERPSMTDVVAMLEGSVDGLQIPPKPYLFGPPATDLLQAAASASSSSTSY 532
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 73341188 73344633 + Tan0017374.1 Tan05g2242 753550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2242 532 PANTHER RUST RESISTANCE KINASE LR10-RELATED 166 513 IPR045874 GO:0004672(InterPro)
Tan05g2242 532 FunFam PR5-like receptor kinase 295 507 - -
Tan05g2242 532 Gene3D Phosphorylase Kinase; domain 1 193 294 - -
Tan05g2242 532 ProSiteProfiles Protein kinase domain profile. 220 510 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2242 532 Pfam Protein kinase domain 223 493 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2242 532 ProSitePatterns Protein kinases ATP-binding region signature. 226 248 IPR017441 GO:0005524(InterPro)
Tan05g2242 532 Gene3D Transferase(Phosphotransferase) domain 1 295 503 - -
Tan05g2242 532 Pfam Wall-associated receptor kinase C-terminal 73 153 IPR032872 -
Tan05g2242 532 SMART serkin_6 220 495 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2242 532 ProSitePatterns Serine/Threonine protein kinases active-site signature. 343 355 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g2242 532 SUPERFAMILY Protein kinase-like (PK-like) 196 496 IPR011009 -
Tan05g2242 532 FunFam S-receptor-like serine/threonine-protein kinase 188 294 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2242 Tan-Chr5:73341188 Tan05g2244 Tan-Chr5:73349212 6.00E-195 dispersed
Tan05g2241 Tan-Chr5:73336661 Tan05g2242 Tan-Chr5:73341188 3.10E-188 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67653 PF00069 Pkinase 4.10E-47 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2242 - - - 0.0