Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2248 ATGGAATTTCCTCTCTGGAGAATTGAAGGAACACAAAGCTGCGGTCCTCCTGAGACAATAAACCTTAATTGCCAGGGAAGTCGTGCAACCATAGAAATCTTGGGAGCAGAATACGAACTAGTTGGTTTTAATACGCAAGATCAAATTTTTCTAATAGCTCAAAACTATTTTTCATATTCTTTTTGTTCGCAAGATACTTCGAGTTCCACCCTCTATGGGATCATCCCTCTATCAGACTACTGCGGGCAGCCTGAAAAACCTACTAATTGTTCTGAATCTGAAAGTAGACTTAGTTACTCGCCATTAGATCAAAACAAGACTACTGCTACTACTGCTAATGGTGATCCATATTGTAAGATAAGCACAGTAGTGTATATTTCTCCAGTGTTGTTTAAAGAAGTTGGTGATTTGCAAAAGTTAGAGCAGCATATTAGAGCAGAGTTTGAGGCTCGGCCGAAGGTAGAGGGTCAAGTATGTAGAAGCTGCAGTGGCCTTGCTGGTGTTTGTGGTTATGACTTTCTTTCAGATCGAACCAGTTGCTTCTGCAAATCACCCTCTAATGGATTTCAAGATTGTTCTTCCAAAACCATCATTCAAGAATATCATTCATCCAGATCTGGAAAGTCAGTTTTGTTGAAGAAAATATTAATCATACTAATTGCGTTTGCTTCAGTTTGCATCATGATGATAATCTCCATCGTCATCTTCATCTACTACACAAGAAAAAGCATCTCAAAAAAATATGATGTTGAAGAAGTTATTAAGAGATATTCGACACTAACACCCAAGCGATACAGTTACTCAAAGCTGAAAAAGGTCACAAATTCCTTCAAGAACAAGCTTGGCCAAGGAGGATTTAGCACCGTCTACAAAGGAAAGCTATCGAGCGGTCGAGATGTGGCTGTGAAACTCTTGAATGATGAATATTCCAAAGAAAATGGTCAAGATTATATGAATGAAGTTGTAAGCATCACTAAAACTTCACACATAAACATAGTCACTCTGTTGGGCTTCTGCTACGAGCAGAATAAAAGAGCTTTGATTTATGAGTATATGCCGAAAGGGTCTTTGGATAAGTATATATCTCAAAAAGCAGGGGAGAATGAAATAAAGTTGGATTTGAATACACTCTATAACATTGTTATCGGCATTGCTCGAGGGTTGGAGTACTTGCATTGCGGTTGTAACACAAGGATTGTGCATTTTGACATCAAACCACACAACATTCTTTTGGACAATGAATTCTGCCCCAAGATATCAGACTTTGGGCTTGCCAAGCAATGTGGGGCGCGAGAGAGTCACGTGTCGATGACAGGTATGAAGGGAACGATAGGTTTCATGGCGCCGGAAGTAATGTTTAGAAGCTTTGGCAAGGTTTCCCACAAGTCTGATGTTTATAGCTTTGGAATGTTGGTTCTCACAATGGTGGGAGAAAGAAGGAATTCCAAGGAAGGAGTAGATGATGAGCAGAGTACTAATGAAGGTTGTTTTCCAGTTTGGATGTATAATGATCTTACCCAAATTAGTGAAATAGATCATCATGAATTAGAAGAAGAAATGGCAATTAAAAAAATGATAATTGTGGGGTTGCATTGCATTCAAACATTGCCGGATGATAGGCCGTCGATGAGTGATGTGGTTGCGATGTTAGAAGGCAGTGTTGACGGATTACAGATTCCGCCGAAACCGACCTTGTTTGAACCTCCTGTGCTGCCTCAAGCTTCTTCTTCATCAACCATGTATTTATGA 1749 39.68 MEFPLWRIEGTQSCGPPETINLNCQGSRATIEILGAEYELVGFNTQDQIFLIAQNYFSYSFCSQDTSSSTLYGIIPLSDYCGQPEKPTNCSESESRLSYSPLDQNKTTATTANGDPYCKISTVVYISPVLFKEVGDLQKLEQHIRAEFEARPKVEGQVCRSCSGLAGVCGYDFLSDRTSCFCKSPSNGFQDCSSKTIIQEYHSSRSGKSVLLKKILIILIAFASVCIMMIISIVIFIYYTRKSISKKYDVEEVIKRYSTLTPKRYSYSKLKKVTNSFKNKLGQGGFSTVYKGKLSSGRDVAVKLLNDEYSKENGQDYMNEVVSITKTSHINIVTLLGFCYEQNKRALIYEYMPKGSLDKYISQKAGENEIKLDLNTLYNIVIGIARGLEYLHCGCNTRIVHFDIKPHNILLDNEFCPKISDFGLAKQCGARESHVSMTGMKGTIGFMAPEVMFRSFGKVSHKSDVYSFGMLVLTMVGERRNSKEGVDDEQSTNEGCFPVWMYNDLTQISEIDHHELEEEMAIKKMIIVGLHCIQTLPDDRPSMSDVVAMLEGSVDGLQIPPKPTLFEPPVLPQASSSSTMYL 582
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 73399194 73402063 + Tan0015325.1 Tan05g2248 753556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2248 582 SMART serkin_6 275 550 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2248 582 SUPERFAMILY Protein kinase-like (PK-like) 256 551 IPR011009 -
Tan05g2248 582 FunFam PR5-like receptor kinase 352 562 - -
Tan05g2248 582 Pfam Wall-associated receptor kinase C-terminal 90 183 IPR032872 -
Tan05g2248 582 ProSitePatterns Serine/Threonine protein kinases active-site signature. 399 411 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g2248 582 Pfam Protein kinase domain 278 547 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2248 582 ProSitePatterns Protein kinases ATP-binding region signature. 281 303 IPR017441 GO:0005524(InterPro)
Tan05g2248 582 FunFam serine/threonine-protein kinase PBS1-like 243 351 - -
Tan05g2248 582 Gene3D Transferase(Phosphotransferase) domain 1 352 558 - -
Tan05g2248 582 ProSiteProfiles Protein kinase domain profile. 275 565 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2248 582 Gene3D Phosphorylase Kinase; domain 1 248 351 - -
Tan05g2248 582 PANTHER RUST RESISTANCE KINASE LR10-RELATED 202 569 IPR045874 GO:0004672(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2248 Tan-Chr5:73399194 Tan11g1728 Tan-Chr11:17362786 1.10E-59 dispersed
Tan05g2248 Tan-Chr5:73399194 Tan05g2249 Tan-Chr5:73410302 3.20E-173 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67656 PF07714 PK_Tyr_Ser-Thr 1.70E-48 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2248 - - - 0.0