Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2254 ATGGCGGCCAAAAGATTGTTCTGTGAAACAGAGCCCGGTTTAGATTCGCCTCCTGAGAAGAAGCGCCCACGCCAAACATTTGCATCGATAATTGGGGAAGTTGTTATGGTGAATTCTTTAAGGCATCTTTCGAAAGCATTGGAACCATTGCTCAGACGAGTGGTGAATGAGGAAGTTGATCGATGTTTAATGCGGTATTCCAGATCCTTAACGAGGGCTTCGTCGTTGAGGATTCAAGCTCTGGAGCCCTCCAGTTTTCAATTGTATTTTGTGAATAAGGTTCCGTCTACCATTTTTACTGGAAGTAAGATTACAGATGTGGAAAGTCAGGCGCTGCGGATTGCCGTCGAGGACGGCGGAGGAGATCTGCCGTCGCCGATTTCTTCGTCTGTGAAAATAGAAATTGTGGTGCTCGATGGCGATTTTCCTGGTGATAAACAGGACTGGACTGCGGAGGAATTTAATGCTAACATTGTCAAAGAGCGGACCGGAAGGAGGCCGCTGCTTCACGGCGATATGAATATAACTCTCCGGCACGGCGCTGCAACCATCGGAGATATTGAATTCACGGATAACTCCAGTTGGATTAGGAGCAGGAAGTTTCGGCTTGGGGCCCGAATTATTTCAGGGTCGGATCGTGATAAAGGCCCCCGGATCCGGGAAGCTATAAGCGAACCGTTTGTGGTCAAAGATCACCGTGGGGAATTGTACAAAAAGCATTATCCACCAATGTTGCATGATGAAGTTTGGAGGTTGGAAAAGATTGGAAAAGAAGGAGTCTTCCACAAGAAGTTAAGCAATCACAACATTAGAACAGTTCAAGAGTTCCTAAAGCTCTTCATTATTGACTCACAAAAGCTAAGAACGATTTTAGGAGTAGGGATGTCGGAAAAAATGTGGGAAGCAACCGTCAAACATGCAAAGACATGCGAATTGGGAAACAAGCTATATTTATTCCGTGGACACAATTTCTTGCTTTTCTTGAACCCCATTTGTGAAGTTGTTCGAGCAGTAATTGGTGAACAAATTTATTCATTTCCAGACCTTCACAATATTCACGAGGTGCGTTCTCATCCATTTGATAACAATTTTGTTAGATAA 1101 44.41 MAAKRLFCETEPGLDSPPEKKRPRQTFASIIGEVVMVNSLRHLSKALEPLLRRVVNEEVDRCLMRYSRSLTRASSLRIQALEPSSFQLYFVNKVPSTIFTGSKITDVESQALRIAVEDGGGDLPSPISSSVKIEIVVLDGDFPGDKQDWTAEEFNANIVKERTGRRPLLHGDMNITLRHGAATIGDIEFTDNSSWIRSRKFRLGARIISGSDRDKGPRIREAISEPFVVKDHRGELYKKHYPPMLHDEVWRLEKIGKEGVFHKKLSNHNIRTVQEFLKLFIIDSQKLRTILGVGMSEKMWEATVKHAKTCELGNKLYLFRGHNFLLFLNPICEVVRAVIGEQIYSFPDLHNIHEVRSHPFDNNFVR 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 73456852 73459870 - Tan0007403.5 Tan05g2254 753562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2254 366 Pfam Calmodulin binding protein C-terminal domain 315 353 IPR046829 -
Tan05g2254 366 Pfam Calmodulin binding protein-like N-terminal domain 86 232 IPR046831 -
Tan05g2254 366 PANTHER OS02G0177800 PROTEIN 21 346 IPR012416 GO:0003700(PANTHER)|GO:0005516(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:0080142(PANTHER)
Tan05g2254 366 MobiDBLite consensus disorder prediction 1 22 - -
Tan05g2254 366 Pfam Calmodulin binding protein central domain 244 310 IPR046830 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2251 Tan-Chr5:73456852 Tan05g2254 Tan-Chr5:73456852 2.90E-207 dispersed
Tan05g2252 Tan-Chr5:73456852 Tan05g2254 Tan-Chr5:73456852 2.10E-170 dispersed
Tan05g2254 Tan-Chr5:73456852 Tan09g1664 Tan-Chr9:68295586 7.30E-91 dispersed
Tan05g2253 Tan-Chr5:73456852 Tan05g2254 Tan-Chr5:73456852 1.90E-170 tandem
Tan05g2254 Tan-Chr5:73456852 Tan05g2255 Tan-Chr5:73456852 5.20E-214 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2254 - - - 0.0