Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2264 ATGCTTTCGATGGGGCTTTTGTCTTCTCTCTGCGCCTGCTTGCAGAAGAGACTTGAAGCCGCTAATTCAGCAGGTGCCGATGGAGCGGATGATGAAGATGTGTCTACGGATATCTTCTTTGAACTCAGTGCTCTGCAAATTGCTACTAATTTCTTTTCCGAGGGGAATAAGCTCGGCCATGGAGGGTTTGGGCCGGTCTACAAGGGGTTGATGCCAAATGGTCAACAAGTAGCAGTCAAGAAGCTATCAGTAGATTCAAGACAAGGAGTGAGGCAGTTTAGTAATGAAGTGAAACTTTTACTGAGAATTCAGCACAGAAACTTGGTCATTTTATTGGGCTGTTGTATAGAAGGACCTGAAAAGATGCTTGTTTATGAGTACCTCCCAAACAGAAGCCTCGACTACTTTCTTTTTGATAAAAAGAAGTCTCCGTCCCTGCATTGGACAACACGATTCCATATAATTACAAGTATTGTGAGAGGTCTTCTCTACTTACATGAGGAGGCTCCTGCAAGAATAATACATAGAGATATCAAAGCCAGTAACATATTACTAGATGAGCAATTGAATCCAAAAATCTCAGATTTTGGTTTAGCACGACTTTTTCCCGGGGATGACACACATTTGAATACATTTAAGATCGCTGGAACTTATGGCTATATGGCTCCTGAATATGCACTTCATGGATATTTGTCTGTGAAGAGTGACGTTTTCAGTTTTGGTATCTTAGTATTAGAGATTGTTAGCGGAAGAAAAAATCACGACAATGGGCTCAGTGTACAAAAGGCTGACCTCTTGGGATATGCATGGTCGCTTTACCAAGAAGGGAAGATTTTAGAATTAGTTGATCAAAGCCTAACAAAATGCAATGCAGATGAGGCAGCTATGTGCATTCAGTTGGGTTTGTTATGTTGTCAAGCGAGTGTTACAGATAGGCCTGATATGAATACCATTCATCTCATGCTTTCAAGTGATTCATTCACGTTGCCACGACCCGGAAAACCTGGAATTATTGGTCGAGGAGCACGTAAGATGACTACCTCTACTTCCACTTTCACCAATACAAATACTGCCAGTACACAAACTTATGTGACCAGAGCTTCTGCAGGTAGTAGTAGTTTGATAGAGGATTATTCAAGAAATTCAATATCTGTTTCTTCTATTGATGATGGCAGGTGA 1179 41.22 MLSMGLLSSLCACLQKRLEAANSAGADGADDEDVSTDIFFELSALQIATNFFSEGNKLGHGGFGPVYKGLMPNGQQVAVKKLSVDSRQGVRQFSNEVKLLLRIQHRNLVILLGCCIEGPEKMLVYEYLPNRSLDYFLFDKKKSPSLHWTTRFHIITSIVRGLLYLHEEAPARIIHRDIKASNILLDEQLNPKISDFGLARLFPGDDTHLNTFKIAGTYGYMAPEYALHGYLSVKSDVFSFGILVLEIVSGRKNHDNGLSVQKADLLGYAWSLYQEGKILELVDQSLTKCNADEAAMCIQLGLLCCQASVTDRPDMNTIHLMLSSDSFTLPRPGKPGIIGRGARKMTTSTSTFTNTNTASTQTYVTRASAGSSSLIEDYSRNSISVSSIDDGR 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 73544255 73548490 + Tan0017875.1 Tan05g2264 753572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2264 392 FunFam Cysteine-rich receptor-like protein kinase 41 128 328 - -
Tan05g2264 392 SUPERFAMILY Protein kinase-like (PK-like) 37 350 IPR011009 -
Tan05g2264 392 ProSiteProfiles Protein kinase domain profile. 52 322 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2264 392 FunFam Cysteine-rich receptor-like protein kinase 2 20 127 - -
Tan05g2264 392 SMART serkin_6 52 327 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2264 392 CDD STKc_IRAK 58 322 - -
Tan05g2264 392 Gene3D Transferase(Phosphotransferase) domain 1 128 328 - -
Tan05g2264 392 Gene3D Phosphorylase Kinase; domain 1 16 127 - -
Tan05g2264 392 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 337 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Tan05g2264 392 Pfam Protein tyrosine and serine/threonine kinase 55 320 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g2264 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2264 Tan-Chr5:73544255 Tan05g3149 Tan-Chr5:83487339 3.80E-93 dispersed
Tan05g2264 Tan-Chr5:73544255 Tan02g0283 Tan-Chr2:2432606 5.10E-98 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67658 PF07714 PK_Tyr_Ser-Thr 2.80E-46 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2264 - - - 0.0