Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2299 ATGGCTTCTGATCTCCCCTGTTCTTCATTCTTCTTCTTCTTCTTCTTCTTCCTCTCTCTGTCCTTCCACTTCTTCTCTGCAACTTCAACTCAATTCCTCGTCGGTGATGAAGATGGCTGGGCTGTCCCTAAGCCAAAAGAAGCTGATAGATATAATAAATGGGCCTCCCATAACAGATTCAATGTCGATGACACTGTCCATTTCAAGTACGAGAAGGATTCAGTGATGGTGGTGACAGAGGAAGAGTACAAGCAATGCTTTTCTCCAAAGCCTCTGTTTTACGGCAACAATGGCGACACAGTGGTGAAACTTGACAGAGGAGGGTTGTTCTATTTCATAAGTGGAGTTTCAGGGCACTGTGAGAAAGGCCAGAGAATGATAATCAAAGTGTTGGAACCGCTCAGCCCGCCTCAACCACCCACTGCTCAGAGGAACAATGCGGTCTCTGTTTCATCTCCAATGTTGGGAATGTTCTTCTTCTTCTTCTTCTTCTTTCTTTCGTTTCTCTTCATTTGA 516 44.77 MASDLPCSSFFFFFFFFLSLSFHFFSATSTQFLVGDEDGWAVPKPKEADRYNKWASHNRFNVDDTVHFKYEKDSVMVVTEEEYKQCFSPKPLFYGNNGDTVVKLDRGGLFYFISGVSGHCEKGQRMIIKVLEPLSPPQPPTAQRNNAVSVSSPMLGMFFFFFFFFLSFLFI 171
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 74473466 74474117 + Tan0006279.1 Tan05g2299 753607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2299 171 CDD OsENODL1_like 30 131 IPR041846 -
Tan05g2299 171 FunFam Early nodulin-like protein 1 29 134 - -
Tan05g2299 171 Gene3D - 28 134 IPR008972 -
Tan05g2299 171 PANTHER BLUE COPPER PROTEIN 17 137 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Tan05g2299 171 SUPERFAMILY Cupredoxins 29 131 IPR008972 -
Tan05g2299 171 Pfam Plastocyanin-like domain 47 124 IPR003245 GO:0009055(InterPro)
Tan05g2299 171 ProSiteProfiles Phytocyanin domain profile. 30 132 IPR003245 GO:0009055(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2299 Tan-Chr5:74473466 Tan11g0690 Tan-Chr11:5982009 8.00E-32 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2299 - - - 0.0