Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2307 ATGGCGATGAAGATGGCCGCCATCAGAGCTTCTGCCATTCCCAGACAACGCCCTCTTCCTTCTTCCTCTCATAGAACCGATTCCAAATCCCAATTCCGTCCCATCTCCGTCGCCCTACCGGCCTCCACTACCGTCTCTCTCTTAGCCCTATTTTCTCCTCCTCCGTACGAAGCTAGGGCTCTCAGCAAAGACCAAATCATCTCGTCTCTCAATGATGTGGAGAAGACGTTTGATCAGGTTCAAGAAGTGGGTTCGAATTTCTTTGATATTGCACAACAGGTCATTGACTCTGCTAGAAATATTTTGAAACCGGGCGTCGATGCGGCGCTGCCGATTGTGAAGCAGGCTGGAGAAGAGGCGCTGAAGGTTGCTTCTCCAACAATTTCTGAGGCTTCAAAGAAAGCCTTAGAAGCACTTGAGGGCTCTGGCATTGACACCGAGCCTGTTCTAAGTGCTGCTAAGACAGTAGTTGGTGCAGCACAACAAACTGGTAAGGTCATTGAAGGTGCCAAGCCTATAGCCTCATCGACTGTCGAGAAGATCTCTGCAGCGGATCCTCTTGTAATTGCTGAAGTTGCTGGAGTCTTAGGCTTGGCATATCTGCTTTTTCCTCCAATATGGTCTGCCATCTCTTTCAGCTTTCGTGGTTACAAAGGTGAACTCTCTCCTGCTCAAACACTTGATCTCATTTCATCGAGCAATTACTTTCTGATCGATATACGATCCGAGAAGGACAAGGATAAATCTGGCATTCCTCGACTTCCTTCTAGTGCTAAGAACCAATCAATTGCCATTCCTTTGGAAGAATTACCAAGCAAGTTGCGGGGCATTGTCCGAAACGTAAAGAAACTAGAAGCTGAACTTTCAGCCATCAAGATTTCGTATCTCAAGAAACTTAACAAAGGCTCCAATATAGTGATCTTGGGCTCGTACTCAGACTCAGCAAAAGCAGTTGCAAAGGCACTGACAAGCCTTGGCTTCAAGAACTCCTGGATTGTGACCGATGGGTTTTTAGGTAGCAAAGGTTGGTTACAGAGTCGGTTAGGAACGGATACATATAAGTTCTCGTTCGCAGAGATTCTTTCGCCATCCCGAGTCATCCAAGCAGGAACCAAACGTTTCGGGACAACCTCACTGACATCTGCATCATCTGGTCAAAAATTGCTTCCTGGTGCTGAATAA 1182 46.95 MAMKMAAIRASAIPRQRPLPSSSHRTDSKSQFRPISVALPASTTVSLLALFSPPPYEARALSKDQIISSLNDVEKTFDQVQEVGSNFFDIAQQVIDSARNILKPGVDAALPIVKQAGEEALKVASPTISEASKKALEALEGSGIDTEPVLSAAKTVVGAAQQTGKVIEGAKPIASSTVEKISAADPLVIAEVAGVLGLAYLLFPPIWSAISFSFRGYKGELSPAQTLDLISSSNYFLIDIRSEKDKDKSGIPRLPSSAKNQSIAIPLEELPSKLRGIVRNVKKLEAELSAIKISYLKKLNKGSNIVILGSYSDSAKAVAKALTSLGFKNSWIVTDGFLGSKGWLQSRLGTDTYKFSFAEILSPSRVIQAGTKRFGTTSLTSASSGQKLLPGAE 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 74529162 74537823 + Tan0019578.1 Tan05g2307 753615

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2307 393 ProSiteProfiles Rhodanese domain profile. 231 352 IPR001763 -
Tan05g2307 393 CDD RHOD 225 339 - -
Tan05g2307 393 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 55 350 IPR044690 GO:0009704(InterPro)|GO:0071277(InterPro)|GO:0090333(InterPro)
Tan05g2307 393 MobiDBLite consensus disorder prediction 16 33 - -
Tan05g2307 393 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 220 339 IPR036873 -
Tan05g2307 393 MobiDBLite consensus disorder prediction 13 33 - -
Tan05g2307 393 SMART rhod_4 221 349 IPR001763 -
Tan05g2307 393 Gene3D - 218 357 IPR036873 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2307 - - - - 0.0
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g389 . . . . . . . . Cmo13g01091 . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi02g00153 Csa01g00637 Chy12g01465 Cme12g01908 . . . Bda14g00903 . Bpe15g00555 . . Sed01g2262 . . Cma13g01050 . Car13g00883 . Cpe09g01146 . Bhi08g01041 Tan05g2307 Cmetu03g1392 Lac10g0201 Hepe07g2429 . . Cla04g01122 Cam04g1175 Cec01g1687 Cco01g1735 Clacu04g1203 Cmu04g1182 Cre01g1480 . . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Tan01g0733 . 59 376 Sulfurtransferasese/Rhodanese AT1G79230 74.2 2.9e-144 508.8
Tan01g0734 . 59 376 Sulfurtransferasese/Rhodanese AT1G79230 74.2 2.9e-144 508.8
Tan01g0735 . 59 376 Sulfurtransferasese/Rhodanese AT1G79230 74.2 2.9e-144 508.8
Tan01g0733 . 59 323 Sulfurtransferasese/Rhodanese AT1G16460 74.7 6.9e-115 411.0
Tan01g0734 . 59 323 Sulfurtransferasese/Rhodanese AT1G16460 74.7 6.9e-115 411.0
Tan01g0735 . 59 323 Sulfurtransferasese/Rhodanese AT1G16460 74.7 6.9e-115 411.0
Tan05g2307 . 19 310 Sulfurtransferasese/Rhodanese AT5G23060 58.3 3.9e-77 285.8
Tan10g0136 . 1 433 Sulfurtransferasese/Rhodanese AT4G01050 51.6 9.4e-113 404.8
Tan09g0069 . 6 597 Sulfurtransferasese/Rhodanese AT1G09280 64.8 4.5e-228 788.1
Tan04g1449 . 86 438 Sulfurtransferasese/Rhodanese AT2G40760 76.2 1.3e-156 550.4
Tan07g1153 . 74 418 Sulfurtransferasese/Rhodanese AT1G17850 68.6 3.1e-152 535.8
Tan07g1154 . 74 429 Sulfurtransferasese/Rhodanese AT1G17850 66.3 9.4e-149 524.2
Tan07g1155 . 63 364 Sulfurtransferasese/Rhodanese AT1G17850 67.8 2.0e-130 463.4
Tan07g1156 . 74 259 Sulfurtransferasese/Rhodanese AT1G17850 64.2 3.1e-67 253.4
Tan03g0168 . 31 229 Sulfurtransferasese/Rhodanese AT2G42220 74.9 6.6e-85 311.2
Tan08g2136 . 334 545 Sulfurtransferasese/Rhodanese AT3G08920 59.0 1.1e-67 253.8
Tan09g2314 . 1 293 Sulfurtransferasese/Rhodanese AT4G24750 67.9 3.9e-111 398.7
Tan07g0806 . 67 292 Sulfurtransferasese/Rhodanese AT5G19370 65.2 9.3e-84 307.8
Tan01g1738 . 117 468 Sulfurtransferasese/Rhodanese AT5G55130 72.2 4.4e-149 525.0
Tan01g0061 . 61 241 Sulfurtransferasese/Rhodanese AT4G27700 79.6 2.6e-78 289.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010320 1 1 1 0 1 1 1 1 1 1 1 1 2 1 1 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 32