Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2321 ATGGAGCTTCCTCAACCTCCCCGTCCCCTCGGAACCGAAGGACGGAAACCAACGCATGACTTTCTGTCACTCTATAGTCATTCAACTGCCCACCAACAAGATCCATCCCAGTCCTTTCAAGGAGGTTATCTTAAAACGCATGATTTTCTCCAGCCGTTCGAACGGATTGGGAAGACATGTGCTAAGGAAGAGAAAACAATTAATGCGTCCACTGCGGAACGAGCAGCGCCACTGCTGGTAACTCCAGCACATAATTCTTCTGTCGAGCGTCTTTTACCAGGTGGAATTGGGACTTACAGTATTAGCCACATTTCTTATTTCAACCAGAGGGTTCCAAAGCCAAAAGGATCGATATTTTCAGTCGCTCAGGCGAGTAATACGGACAAAAGTGATGACAACTCCCGTTGTAGTTCTTTGTCTGGAAGTGGTTTCACGTTGTGGGAAGAATCTGCAGTTAAAAAGGGAAAGACAAAGAAGGAGAATTTGGGTGAAAAGCCCAGTTTAAGGGAACCACCGGCGAAGATTGAACAATGGGCCGTTTCAACGGAGCGGCCAACACAATCATCATCAAGCAACCATCGCAACAGCTTCAGCTCTCTTTCTTCTTCTCAGCCTTCAGGCCAACTGAACCGGAGCTTCGGTGAGATGTTGAAGTCCGCAGTCAAGGTTTCCTCTGAGGAAGAGGAATTAGACGACGGCAAAGCATTTGTTATTAAGAAAGAATCATCGCCATCCACTGCCTATAAAGGTGAATTGAGCATAAATGTCGGTGGAAAATGCTCTGATCAGAAGGCTAACACGCCGAGATCCAAACATTCTGCAACAGAACAGCGACGACGGAGCAAAATTAATGACAGGTTTCAGAAGTTGAGAGAACTTATTCCTCGTAGCGATCAGAAGAGAGACAAGGCATCATTTTTGTTAGAGGTTATCGAGTACATTCAGTTTTTACAAGAAAAGGTTCGCAAGTATGAAAGCTCACCACCGCAAGGATGGTACCATGAACCAGCCAAATTAATCCCCTGTAGAAACAATTGCAATCCAGCGCAATGTTACATCGATCAATCTCAAGTTGCAAAGAGCGGCCCTATGTTTATATTTGCTGGGTCTAACGAGAAAAATATGTCTCACTTCCCGGCATTTCCTAGGTGCTCGCACAACCCAGTAGAATCCGAAGTTAGTACTTCCACCACCTTCAGAGAAGCGGATCATCATCCTGGAACAACCAACAAAGCAACATCTTATCCAATGTTGCAGCCACGCCATTTCATTCCCGTCATAAGTGAAGGTGCAAAAACTAAACTCCAATATCAAGCGGCATATAATGCAGACAATAAACCATGTGAAATTCAATCCTCACCATTATGTGAGACGAGATCATGTACTACTGATATTGCTGCTGCTGGTAATAAGCGGAAAGAACCAGAGCAGAGTATTGAAGGTGGTAGAATTAGCATCTCAAGTGCATATTCTCAAGGGTCAGTATATTTTCGTATTTCTATATACTTGAGTTTTTCATCCAATAAACAATAA 1533 44.03 MELPQPPRPLGTEGRKPTHDFLSLYSHSTAHQQDPSQSFQGGYLKTHDFLQPFERIGKTCAKEEKTINASTAERAAPLLVTPAHNSSVERLLPGGIGTYSISHISYFNQRVPKPKGSIFSVAQASNTDKSDDNSRCSSLSGSGFTLWEESAVKKGKTKKENLGEKPSLREPPAKIEQWAVSTERPTQSSSSNHRNSFSSLSSSQPSGQLNRSFGEMLKSAVKVSSEEEELDDGKAFVIKKESSPSTAYKGELSINVGGKCSDQKANTPRSKHSATEQRRRSKINDRFQKLRELIPRSDQKRDKASFLLEVIEYIQFLQEKVRKYESSPPQGWYHEPAKLIPCRNNCNPAQCYIDQSQVAKSGPMFIFAGSNEKNMSHFPAFPRCSHNPVESEVSTSTTFREADHHPGTTNKATSYPMLQPRHFIPVISEGAKTKLQYQAAYNADNKPCEIQSSPLCETRSCTTDIAAAGNKRKEPEQSIEGGRISISSAYSQGSVYFRISIYLSFSSNKQ 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 74707673 74714042 + Tan0010529.5 Tan05g2321 753629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2321 510 SMART finulus 273 323 IPR011598 GO:0046983(InterPro)
Tan05g2321 510 MobiDBLite consensus disorder prediction 265 282 - -
Tan05g2321 510 Pfam Helix-loop-helix DNA-binding domain 269 318 IPR011598 GO:0046983(InterPro)
Tan05g2321 510 MobiDBLite consensus disorder prediction 155 210 - -
Tan05g2321 510 MobiDBLite consensus disorder prediction 395 415 - -
Tan05g2321 510 MobiDBLite consensus disorder prediction 1 37 - -
Tan05g2321 510 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 267 317 IPR011598 GO:0046983(InterPro)
Tan05g2321 510 MobiDBLite consensus disorder prediction 180 210 - -
Tan05g2321 510 MobiDBLite consensus disorder prediction 249 282 - -
Tan05g2321 510 Gene3D - 264 330 IPR036638 GO:0046983(InterPro)
Tan05g2321 510 MobiDBLite consensus disorder prediction 22 37 - -
Tan05g2321 510 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 266 326 IPR036638 GO:0046983(InterPro)
Tan05g2321 510 CDD bHLH_AtBIM_like 266 343 - -
Tan05g2321 510 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 13 493 IPR044295 GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0046983(InterPro)
Tan05g2321 510 MobiDBLite consensus disorder prediction 155 171 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2319 Tan-Chr5:74707673 Tan05g2321 Tan-Chr5:74707673 9.90E-262 dispersed
Tan05g2321 Tan-Chr5:74707673 Tan09g1998 Tan-Chr9:70699606 8.50E-130 dispersed
Tan05g2320 Tan-Chr5:74707673 Tan05g2321 Tan-Chr5:74707673 8.80E-285 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27566 PF00010 HLH 4.50E-16 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2321 - - - 0.0