Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan05g2343 | ATGTTTTTAGAACACGAGTTTCTGTTCGTTCCCTCATCTGGGTTTGCCTCAACAATGGCAAATCTCAACTTCCTTGTGTGTTTCCTTCTCTTCGTCGCCGTTCTTGGCCTTTGCCTCAGCCCTGGCGGTCTAGCCTGGGCTTTGGTTTCAAAGCCAAGAAACAAACCCATCATTCCTGGGCCTTGTGGCACCCCTGTTTTAGGTCAAGTTTCAACCTTTACTTCTTCTCTCACTCATAGAGCTCTCGCCAGGCTCGCTCAGACCTTAAAGGCGAAATCTTTAATGTCATTCTCAGTTGGGTTCACTCGTTTTGTGATTTCAAGCAACCCCATCACTGCCAAAGAGCTTTTGAACAGCTCGGCTTTTGCTGATCGTCCCATTAAAGAGTCGGCTTATGAGCTTTTGTTTCATAGAGCAATGGGGTTTGCTCCTTATGGAGAGTATTGGAGGAATCTTAGGAGAATCTCTTCCACTTTTTTGTTTAGTCCCAAAAGAATTTCGTGTTTTGGGAAGTTGAGAGAGAGAATTGGGGTTCAAATGGTGGAGGAAATCAAAGGTTTGATGGAGAAAAATGGGGAAGTTGAAGTGAGAAAAATTTTGCATTTTGGGTCATTGAATAATGTGATGGGAAGTGTTTTTGGGAAAAGTGGTTATGAGTTTGATAGTGAAAGTGAGCTTGAGGGATTGGTGAGTGAAGGATATGATTTGCTTGGAAGTTTTAATTGGAGTGATCACTTTCCTCTTTTGGGTTGGTTGGATTTGCAAGGTGTGAGAAAAAGGTGCAAAATTTTGGTGGGTAAAGTGAATGTTTTTGTTGGCAAAATCATAGAGGAGCATAGAATGAATAGGAGGATTATTAAAGTTCAAGAAGGACCTATTATTATTCATGATCATAATGAAGATGGAGATTTTGTTGATGTGTTGCTTGATTTGGAAAAGGAAAACAAACTCACTGACTCTGATATGATTGCTGTGTTATGGGAGATGATCTTCAGAGGAACAGACACAGTGGCAATTCTCCTAGAATGGATTGTAGCAAGAATGGTTCTTCATCCCGAAATCCAAACGAAACTCCAAACCGAAATCGACCGAGTCGTTAAAACCGGCCGAAACGTTTCGGATTCGGACCTCCCAAATCTCCCTTATCTCCATGCAGTCGTCAAAGAGACTCTAAGAATGCACCCCCCGGGCCCACTTCTCTCGTGGGCCCGCCTCGCCATCCACGACACCCACGTCGGCGGCCACTTCATTCCCTCCGGCACCACCGCCATGGTCAACATGTGGGCCATAACCCACGACGACCAAATCTGGCCCGACCCGACCTCATTCGACCCGGAGCGCTTCATAAAAGACGACGTCCCCATAATGGGGTCAGATCTGCGCCTGGCGCCGTTCGGGTCCGGAAGAAGGGTCTGCCCTGGCAAGGCCATGGGGCTAGCCACTGTCGAGCTTTGGCTCGCTCAGTTGGTTCAGAGGTTCGAATGGGTGGCTCCGGTGGGCTCTGAAAATAATGGAGTGGATTTGTCTGAGTGTTTGAAGCTGTCATTGGAAATGAAACAGCCCTTAATCTGTAGGGCTGTTCCTAGAATTGGGAGAAAAAAAATGGGTATTTAA | 1614 | 46.03 | MFLEHEFLFVPSSGFASTMANLNFLVCFLLFVAVLGLCLSPGGLAWALVSKPRNKPIIPGPCGTPVLGQVSTFTSSLTHRALARLAQTLKAKSLMSFSVGFTRFVISSNPITAKELLNSSAFADRPIKESAYELLFHRAMGFAPYGEYWRNLRRISSTFLFSPKRISCFGKLRERIGVQMVEEIKGLMEKNGEVEVRKILHFGSLNNVMGSVFGKSGYEFDSESELEGLVSEGYDLLGSFNWSDHFPLLGWLDLQGVRKRCKILVGKVNVFVGKIIEEHRMNRRIIKVQEGPIIIHDHNEDGDFVDVLLDLEKENKLTDSDMIAVLWEMIFRGTDTVAILLEWIVARMVLHPEIQTKLQTEIDRVVKTGRNVSDSDLPNLPYLHAVVKETLRMHPPGPLLSWARLAIHDTHVGGHFIPSGTTAMVNMWAITHDDQIWPDPTSFDPERFIKDDVPIMGSDLRLAPFGSGRRVCPGKAMGLATVELWLAQLVQRFEWVAPVGSENNGVDLSECLKLSLEMKQPLICRAVPRIGRKKMGI | 537 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 74875006 | 74877725 | - | Tan0010515.1 | Tan05g2343 | 753651 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan05g2343 | 537 | PRINTS | E-class P450 group I signature | 321 | 338 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g2343 | 537 | PRINTS | E-class P450 group I signature | 426 | 450 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g2343 | 537 | PRINTS | E-class P450 group I signature | 462 | 472 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g2343 | 537 | PRINTS | E-class P450 group I signature | 472 | 495 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g2343 | 537 | PRINTS | E-class P450 group I signature | 341 | 367 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g2343 | 537 | PRINTS | E-class P450 group I signature | 384 | 402 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g2343 | 537 | Pfam | Cytochrome P450 | 59 | 500 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g2343 | 537 | Gene3D | Cytochrome P450 | 47 | 526 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g2343 | 537 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 465 | 474 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan05g2343 | 537 | PRINTS | P450 superfamily signature | 463 | 472 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g2343 | 537 | PRINTS | P450 superfamily signature | 385 | 396 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g2343 | 537 | PRINTS | P450 superfamily signature | 332 | 349 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g2343 | 537 | CDD | CYP78 | 90 | 522 | - | - | |
| Tan05g2343 | 537 | PANTHER | CYTOCHROME P450 78A7-RELATED | 8 | 526 | IPR051996 | - | |
| Tan05g2343 | 537 | SUPERFAMILY | Cytochrome P450 | 58 | 529 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan05g2343 | 537 | FunFam | Cytochrome P450 78A5 | 50 | 529 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan02g2286 | Tan-Chr2:91718849 | Tan05g2343 | Tan-Chr5:74875006 | 7.50E-193 | dispersed | |
| Tan04g0050 | Tan-Chr4:451684 | Tan05g2343 | Tan-Chr5:74875006 | 8.40E-154 | dispersed | |
| Tan05g2343 | Tan-Chr5:74875006 | Tan06g1869 | Tan-Chr6:48239787 | 1.10E-135 | dispersed | |
| Tan05g2343 | Tan-Chr5:74875006 | Tan08g1279 | Tan-Chr8:42694608 | 1.10E-66 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan05g2343 | K20619 | - | csv:101203458 | 842.032 |