Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2408 ATGGTTTCAGAGAGAGTTGTTGAATGGAAGAAGAAGAATGTATGTGTAATTGGAGCTGGGCCATCAGGGCTTGTGGCAGCCAGAGAGCTAAGAAAAGAAGGCCACAAAGTTGTTGTTTTTGAACAAAACAACGACATTGGTGGCCAATGGCTCTACGATCCAAATGTCGAAAACGAACATCCTTTAGGAAAAACAACATCGTCCAACAATAATTTCCTTAATGTTCACAGCAGCATTTACTCTTCTTTAAGGATTGCTTCTCCAAGGGAAATCATGGGGTTTTCTGATTTTCCATTTCTGGTCAAGAAAGGCCGTGACACTAGGAGATTTCCTGGCCATAAAGAGCTCTTCTTGTATTTGAATGATTTTTGTGATTGCTTTGGTTTGAGACAGTTCATCAAATTCAATACTAGAGTTGAATATGTGGGAATGTGCGATTATTATTATTCTGTTCATCATCATCTTCTTGGAAAAGATATTCAATGGCTTGTTACAACTAAATCAGATCATAAGATTATGGTTCAACAAGTTTTTGATGCTGTTGTTGTTGCTACTGGACATTATTCTCATCCTAGATTGCCCAACATTAAAGGAATGGACAAATGGAAGAGAAAGCAAATTCATAGTCATGTTTATCGAGTTCCTGAGCCATTTCGTGATGAGATAGTGGTGGTGGTCGGAAACTCTCAAAGTGGGCAAGACATATCGCTAGATCTAGTAGAAGTGGCAAAAGAAATTCATATAAGCACAAGATCCATCAACACCATTACTAAGGGTTTATCTAAAGTCATTGACAAACATCAAAACTTGCATCTTCAACCACAGATTGAATCTCTTGAAGATGATGGGCGGGTGTTGTTTGTTGATGGCTCCTCCATCGTTGCTGATACTATTTTATATTGCACTGGGTATTCATACACATTTCCATTTCTTGACACCAAAGGAATAGTTGTTGTTGATGATGATCGAGTGGGTCCTTTGTATGAACATACTTTTCCCCCATCTTTGGCTCCCTCACTTTCATTTATAGGCATTCCACGAAAGCTCATAGGTTTCCCTTTCTTTGAATCACAAGCAATATGGATAGCTCAACTGCTGTCTGGAAAAAGGACATTGCCATCATGGGATGATATGATGCAATCCATCAAAGAGTTTTATCACTCAAAGGATGTTGCTGGCATTCCAAAGCATAATACCCATGATTTAGCTGATTTTGAGTATTGTGACAAGTATGGCGATAACGTTGGGTTTCCACATTTGGAGGAATGGAGGAAAAAACTGTGCTTATCATCCCTTATAAACTACTTAAACAACCTCGAAACGTTTCGAGATTCGTGGGATGACGATGAGGATCTTCAAGAGGCCTTTCAAAGTCCTCATTTCACTCAACTTGGAGCTCAAGTTTTTCCTCTATAA 1416 38.98 MVSERVVEWKKKNVCVIGAGPSGLVAARELRKEGHKVVVFEQNNDIGGQWLYDPNVENEHPLGKTTSSNNNFLNVHSSIYSSLRIASPREIMGFSDFPFLVKKGRDTRRFPGHKELFLYLNDFCDCFGLRQFIKFNTRVEYVGMCDYYYSVHHHLLGKDIQWLVTTKSDHKIMVQQVFDAVVVATGHYSHPRLPNIKGMDKWKRKQIHSHVYRVPEPFRDEIVVVVGNSQSGQDISLDLVEVAKEIHISTRSINTITKGLSKVIDKHQNLHLQPQIESLEDDGRVLFVDGSSIVADTILYCTGYSYTFPFLDTKGIVVVDDDRVGPLYEHTFPPSLAPSLSFIGIPRKLIGFPFFESQAIWIAQLLSGKRTLPSWDDMMQSIKEFYHSKDVAGIPKHNTHDLADFEYCDKYGDNVGFPHLEEWRKKLCLSSLINYLNNLETFRDSWDDDEDLQEAFQSPHFTQLGAQVFPL 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 75291636 75295809 + Tan0009466.1 Tan05g2408 753716

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2408 471 PIRSF FMO 260 417 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Tan05g2408 471 PIRSF FMO 10 271 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Tan05g2408 471 FunFam Flavin-containing monooxygenase 195 301 - -
Tan05g2408 471 SUPERFAMILY FAD/NAD(P)-binding domain 270 447 IPR036188 -
Tan05g2408 471 Gene3D - 195 301 IPR036188 -
Tan05g2408 471 SUPERFAMILY FAD/NAD(P)-binding domain 10 254 IPR036188 -
Tan05g2408 471 PANTHER DIMETHYLANILINE MONOOXYGENASE 11 463 IPR050346 -
Tan05g2408 471 Gene3D - 14 444 IPR036188 -
Tan05g2408 471 PRINTS Flavin-containing monooxygenase (FMO) signature 12 28 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Tan05g2408 471 PRINTS Flavin-containing monooxygenase (FMO) signature 36 60 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Tan05g2408 471 PRINTS Flavin-containing monooxygenase (FMO) signature 288 315 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Tan05g2408 471 PRINTS Flavin-containing monooxygenase (FMO) signature 353 366 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Tan05g2408 471 Pfam Flavin-binding monooxygenase-like 11 256 IPR020946 GO:0004499(InterPro)|GO:0050660(InterPro)|GO:0050661(InterPro)
Tan05g2408 471 Pfam Flavin-binding monooxygenase-like 271 390 IPR020946 GO:0004499(InterPro)|GO:0050660(InterPro)|GO:0050661(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2408 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2006 Tan-Chr1:22386522 Tan05g2408 Tan-Chr5:75291636 9.30E-115 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g609 Blo04g00784 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi02g00096 . Chy12g01520 Cme12g01966 . . . Bda14g00865 . . Bma03g00842 . Sed08g2095 . . . . . . . . Bhi08g01127 Tan05g2408 Cmetu06g2174 . Hepe07g1737 . . Cla04g01176 Cam04g1233 Cec01g1744 Cco01g1790 Clacu04g1261 Cmu04g1240 Cre01g1534 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009615 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3 1 1 1 1 1 1 1 1 1 1 1 1 33